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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170173084
CEOQ01177633
284706
Gammaproteobacteria
GTT
Asn
>WENV170173844
CEOQ01248985
73123
Gammaproteobacteria
CAA
Leu
>WENV170170540
CEOQ01009310
178164
Gammaproteobacteria
GAT
Ile
>WENV170172873
CEOQ01156374
74766
Gammaproteobacteria
CAG
Leu
>WENV170170979
CEOQ01033402
20618
Gammaproteobacteria
GGA
Ser
>WENV170172629
CEOQ01134395
29834
Gammaproteobacteria
GCT
Ser
>WENV170172046
CEOQ01089927
292194
Gammaproteobacteria
GGT
Thr
>WENV170173129
CEOQ01182090
480653
Gammaproteobacteria
GCA
Cys
>WENV170170846
CEOQ01026543
13452
Gammaproteobacteria
GCT
Ser
>WENV170172262
CEOQ01105383
176663
Gammaproteobacteria
GGG
Pro
>WENV170171132
CEOQ01040815
351236
Gammaproteobacteria
TTT
Lys
>WENV170171133
CEOQ01040815
351236
Gammaproteobacteria
TTT
Lys
>WENV170173230
CEOQ01190524
178168
Gammaproteobacteria
ACG
Arg
>WENV170172232
CEOQ01104050
480516
Gammaproteobacteria
GCA
Cys
>WENV170170697
CEOQ01018365
480516
Gammaproteobacteria
GCA
Cys
>WENV170170512
CEOQ01007456
242732
Gammaproteobacteria
ACG
Arg
>WENV170171241
CEOQ01046576
243308
Gammaproteobacteria
TGG
Pro
>WENV170170503
CEOQ01006940
197498
Gammaproteobacteria
TGG
Pro
>WENV170173500
CEOQ01217333
92638
Gammaproteobacteria
TAA
Leu
>WENV170175041
CEOQ01436475
401684
Gammaproteobacteria
CCT
Arg
>WENV170174319
CEOQ01284945
178169
Gammaproteobacteria
GAC
Val
>WENV170170847
CEOQ01026543
232119
Gammaproteobacteria
ACG
Arg
>WENV170170848
CEOQ01026543
232119
Gammaproteobacteria
ACG
Arg
>WENV170173499
CEOQ01217333
481678
Gammaproteobacteria
GCA
Cys
>WENV170171886
CEOQ01080537
334421
Gammaproteobacteria
TGT
Thr
>WENV170170458
CEOQ01003896
488965
Gammaproteobacteria
GCA
Cys
>WENV170172170
CEOQ01099295
370389
Gammaproteobacteria
GGC
Ala
>WENV170174309
CEOQ01284397
370389
Gammaproteobacteria
GGC
Ala
>WENV170170743
CEOQ01021497
176301
Gammaproteobacteria
GAT
Ile
>WENV170173390
CEOQ01206580
296672
Gammaproteobacteria
GGT
Thr
>WENV170172769
CEOQ01145892
300318
Gammaproteobacteria
GGC
Ala
>WENV170171821
CEOQ01076296
176478
Gammaproteobacteria
CAT
Met
>WENV170173388
CEOQ01206580
141076
Gammaproteobacteria
GTA
Tyr
>WENV170170731
CEOQ01020779
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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