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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181379261
OFRD01000153
33542
Gammaproteobacteria
TGA
Ser
>WENV181379315
OFRD01000423
238674
Gammaproteobacteria
TGT
Thr
>WENV181379370
OFRD01000829
2129
Gammaproteobacteria
>WENV181379512
OFRD01002505
33222
Gammaproteobacteria
GGA
Ser
>WENV181379539
OFRD01002905
16238
Gammaproteobacteria
CGA
Ser
>WENV181379551
OFRD01003062
412505
Gammaproteobacteria
GCA
Cys
>WENV181379638
OFRD01004574
58859
Gammaproteobacteria
CAG
Leu
>WENV181379654
OFRD01005221
162709
Gammaproteobacteria
CCT
Arg
>WENV181379696
OFRD01006214
235837
Gammaproteobacteria
GTT
Asn
>WENV181379780
OFRD01008342
26165
Gammaproteobacteria
GGA
Ser
>WENV181379846
OFRD01011719
2882
Gammaproteobacteria
>WENV181379896
OFRD01013839
411785
Gammaproteobacteria
CCC
Gly
>WENV181379908
OFRD01014413
145335
Gammaproteobacteria
GGG
Pro
>WENV181379994
OFRD01019496
426758
Gammaproteobacteria
GCA
Cys
>WENV181380025
OFRD01021806
144979
Gammaproteobacteria
CGG
Pro
>WENV181380101
OFRD01030837
411593
Gammaproteobacteria
CCC
Gly
>WENV181380150
OFRD01035339
411725
Gammaproteobacteria
CCC
Gly
>WENV181380154
OFRD01036404
319098
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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