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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100702
AEWW01015594
112424
Gammaproteobacteria
GAG
Leu
>WENV170000344
AEWW01015594
112424
Gammaproteobacteria
GAG
Leu
>WENV11100650
AEWW01004243
180097
Gammaproteobacteria
GTA
Tyr
>WENV11100651
AEWW01004243
180097
Gammaproteobacteria
GTA
Tyr
>WENV170000292
AEWW01004243
180097
Gammaproteobacteria
GTA
Tyr
>WENV170000293
AEWW01004243
180097
Gammaproteobacteria
GTA
Tyr
>WENV11100649
AEWW01004136
654015
Gammaproteobacteria
TTG
Gln
>WENV170000291
AEWW01004136
654015
Gammaproteobacteria
TTG
Gln
>WENV11100712
AEWW01016985
275473
Gammaproteobacteria
GGG
Pro
>WENV170000354
AEWW01016985
275473
Gammaproteobacteria
GGG
Pro
>WENV11100645
AEWW01004023
452463
Gammaproteobacteria
TGT
Thr
>WENV170000287
AEWW01004023
452463
Gammaproteobacteria
TGT
Thr
>WENV11100693
AEWW01014613
271529
Gammaproteobacteria
GAC
Val
>WENV170000335
AEWW01014613
271529
Gammaproteobacteria
GAC
Val
>WENV11100719
AEWW01018180
273122
Gammaproteobacteria
CAT
Met
>WENV11100720
AEWW01018180
273122
Gammaproteobacteria
CAT
Met
>WENV11100721
AEWW01018180
273122
Gammaproteobacteria
CAT
Met
>WENV170000361
AEWW01018180
273122
Gammaproteobacteria
CAT
Met
>WENV170000362
AEWW01018180
273122
Gammaproteobacteria
CAT
Met
>WENV170000363
AEWW01018180
273122
Gammaproteobacteria
CAT
Met
>WENV11100701
AEWW01015501
452400
Gammaproteobacteria
CCA
Trp
>WENV170000343
AEWW01015501
452400
Gammaproteobacteria
CCA
Trp
>WENV11100674
AEWW01010319
281160
Gammaproteobacteria
TCT
Arg
>WENV170000316
AEWW01010319
281160
Gammaproteobacteria
TCT
Arg
>WENV11100711
AEWW01016820
653890
Gammaproteobacteria
CCT
Arg
>WENV11100771
AEWW01026499
653890
Gammaproteobacteria
CCT
Arg
>WENV170000353
AEWW01016820
653890
Gammaproteobacteria
CCT
Arg
>WENV170000413
AEWW01026499
653890
Gammaproteobacteria
CCT
Arg
>WENV11100692
AEWW01014402
485115
Gammaproteobacteria
GGG
Pro
>WENV170000334
AEWW01014402
485115
Gammaproteobacteria
GGG
Pro
>WENV11100737
AEWW01021213
90297
Gammaproteobacteria
TGA
Ser
>WENV170000379
AEWW01021213
90297
Gammaproteobacteria
TGA
Ser
>WENV11100790
AEWW01029955
112262
Gammaproteobacteria
CAG
Leu
>WENV170000432
AEWW01029955
112262
Gammaproteobacteria
CAG
Leu
>WENV11100747
AEWW01024721
180098
Gammaproteobacteria
GTA
Tyr
>WENV170000389
AEWW01024721
180098
Gammaproteobacteria
GTA
Tyr
>WENV11100746
AEWW01024721
452504
Gammaproteobacteria
TGT
Thr
>WENV170000388
AEWW01024721
452504
Gammaproteobacteria
TGT
Thr
>WENV11100696
AEWW01014830
453929
Gammaproteobacteria
GAA
Phe
>WENV170000338
AEWW01014830
453929
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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