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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014185
AXCI01000042
273859
Gammaproteobacteria
CGG
Pro
>WENV170014186
AXCI01000069
112814
Gammaproteobacteria
GAG
Leu
>WENV170014187
AXCI01000069
271253
Gammaproteobacteria
CAT
Met
>WENV170014188
AXCI01000286
273854
Gammaproteobacteria
CAT
Met
>WENV170014189
AXCI01000390
454424
Gammaproteobacteria
GAA
Phe
>WENV170014190
AXCI01000390
655386
Gammaproteobacteria
TTG
Gln
>WENV170014194
AXCI01000405
273854
Gammaproteobacteria
CAT
Met
>WENV170014196
AXCI01000454
274204
Gammaproteobacteria
GGG
Pro
>WENV170014200
AXCI01000477
655194
Gammaproteobacteria
GGT
Thr
>WENV170014201
AXCI01000480
655385
Gammaproteobacteria
GCC
Gly
>WENV170014202
AXCI01000480
455342
Gammaproteobacteria
TTC
Glu
>WENV170014203
AXCI01000480
655385
Gammaproteobacteria
GCC
Gly
>WENV170014205
AXCI01000494
454968
Gammaproteobacteria
TAC
Val
>WENV170014207
AXCI01000658
273854
Gammaproteobacteria
CAT
Met
>WENV170014210
AXCI01001121
273854
Gammaproteobacteria
CAT
Met
>WENV170014214
AXCI01001446
454110
Gammaproteobacteria
GGT
Thr
>WENV170014220
AXCI01002177
454964
Gammaproteobacteria
TTC
Glu
>WENV170014223
AXCI01002337
274204
Gammaproteobacteria
GGG
Pro
>WENV170014224
AXCI01002339
454968
Gammaproteobacteria
TAC
Val
>WENV170014225
AXCI01002339
273852
Gammaproteobacteria
GTC
Asp
>WENV170014226
AXCI01002339
273852
Gammaproteobacteria
GTC
Asp
>WENV170014227
AXCI01002339
454968
Gammaproteobacteria
TAC
Val
>WENV170014229
AXCI01002351
273853
Gammaproteobacteria
CAT
Met
>WENV170014230
AXCI01002372
12379
Gammaproteobacteria
GCT
Ser
>WENV170014231
AXCI01002450
274209
Gammaproteobacteria
ACG
Arg
>WENV170014235
AXCI01002600
454964
Gammaproteobacteria
TTC
Glu
>WENV170014236
AXCI01002623
30520
Gammaproteobacteria
TGA
Ser
>WENV170014237
AXCI01002626
780241
Gammaproteobacteria
GCA
Cys
>WENV170014240
AXCI01002940
454964
Gammaproteobacteria
TTC
Glu
>WENV170014241
AXCI01002940
655385
Gammaproteobacteria
GCC
Gly
>WENV170014242
AXCI01002940
454964
Gammaproteobacteria
TTC
Glu
>WENV170014245
AXCI01002990
655194
Gammaproteobacteria
GGT
Thr
>WENV170014246
AXCI01003170
454969
Gammaproteobacteria
GTT
Asn
>WENV170014247
AXCI01003171
454969
Gammaproteobacteria
GTT
Asn
>WENV170014248
AXCI01003241
273856
Gammaproteobacteria
GAC
Val
>WENV170014249
AXCI01003241
273856
Gammaproteobacteria
GAC
Val
>WENV170014251
AXCI01003294
180498
Gammaproteobacteria
TAG
Leu
>WENV170014252
AXCI01003297
655386
Gammaproteobacteria
TTG
Gln
>WENV170014253
AXCI01003297
273854
Gammaproteobacteria
CAT
Met
>WENV170014254
AXCI01003332
273857
Gammaproteobacteria
TGG
Pro
>WENV170014259
AXCI01003370
655385
Gammaproteobacteria
GCC
Gly
>WENV170014260
AXCI01003370
780241
Gammaproteobacteria
GCA
Cys
>WENV170014262
AXCI01003574
273847
Gammaproteobacteria
CCT
Arg
>WENV170014263
AXCI01003606
112813
Gammaproteobacteria
CAG
Leu
>WENV170014264
AXCI01003636
273847
Gammaproteobacteria
CCT
Arg
>WENV170014267
AXCI01003783
273847
Gammaproteobacteria
CCT
Arg
>WENV170014269
AXCI01003832
114536
Gammaproteobacteria
CAA
Leu
>WENV170014270
AXCI01003879
655385
Gammaproteobacteria
GCC
Gly
>WENV170014272
AXCI01003964
273854
Gammaproteobacteria
CAT
Met
>WENV170014273
AXCI01003967
273859
Gammaproteobacteria
CGG
Pro
>WENV170014274
AXCI01003967
112814
Gammaproteobacteria
GAG
Leu
>WENV170014275
AXCI01003967
271253
Gammaproteobacteria
CAT
Met
>WENV170014277
AXCI01004048
274209
Gammaproteobacteria
ACG
Arg
>WENV170014278
AXCI01004048
274209
Gammaproteobacteria
ACG
Arg
>WENV170014279
AXCI01004049
12379
Gammaproteobacteria
GCT
Ser
>WENV170014281
AXCI01004184
112884
Gammaproteobacteria
CAG
Leu
>WENV170014285
AXCI01004428
180498
Gammaproteobacteria
TAG
Leu
>WENV170014286
AXCI01004429
180498
Gammaproteobacteria
TAG
Leu
>WENV170014287
AXCI01004438
655386
Gammaproteobacteria
TTG
Gln
>WENV170014288
AXCI01004520
273857
Gammaproteobacteria
TGG
Pro
>WENV170014292
AXCI01004540
454424
Gammaproteobacteria
GAA
Phe
>WENV170014293
AXCI01004540
655386
Gammaproteobacteria
TTG
Gln
>WENV170014294
AXCI01004561
274204
Gammaproteobacteria
GGG
Pro
>WENV170014295
AXCI01004570
454969
Gammaproteobacteria
GTT
Asn
>WENV170014296
AXCI01004570
454969
Gammaproteobacteria
GTT
Asn
>WENV170014297
AXCI01004587
273856
Gammaproteobacteria
GAC
Val
>WENV170014298
AXCI01004587
273856
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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