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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170175743
CEOS01003536
453897
Gammaproteobacteria
TAC
Val
>WENV170175761
CEOS01005007
270982
Gammaproteobacteria
GAT
Ile
>WENV170175919
CEOS01019016
274209
Gammaproteobacteria
ACG
Arg
>WENV170175934
CEOS01020469
276372
Gammaproteobacteria
ACG
Arg
>WENV170176222
CEOS01052330
673628
Gammaproteobacteria
GTG
His
>WENV170176498
CEOS01084971
218101
Gammaproteobacteria
GTA
Tyr
>WENV170176500
CEOS01084971
655194
Gammaproteobacteria
GGT
Thr
>WENV170176530
CEOS01089132
270982
Gammaproteobacteria
GAT
Ile
>WENV170176546
CEOS01091330
113235
Gammaproteobacteria
GAG
Leu
>WENV170176571
CEOS01094222
273857
Gammaproteobacteria
TGG
Pro
>WENV170176572
CEOS01094222
273858
Gammaproteobacteria
TCT
Arg
>WENV170176606
CEOS01099225
452412
Gammaproteobacteria
GCC
Gly
>WENV170176671
CEOS01108579
273859
Gammaproteobacteria
CGG
Pro
>WENV170176715
CEOS01115569
780241
Gammaproteobacteria
GCA
Cys
>WENV170176714
CEOS01115569
655385
Gammaproteobacteria
GCC
Gly
>WENV170176826
CEOS01127858
271252
Gammaproteobacteria
CAT
Met
>WENV170176947
CEOS01141254
456881
Gammaproteobacteria
GGC
Ala
>WENV170177087
CEOS01178366
458525
Gammaproteobacteria
TAC
Val
>WENV170177184
CEOS01217504
273845
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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