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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170470564
CEVF01299806
218595
Alphaproteobacteria
CAA
Leu
>WENV170470445
CEVF01274817
457159
Alphaproteobacteria
CGC
Ala
>WENV170468817
CEVF01062959
655167
Alphaproteobacteria
TTC
Glu
>WENV170468082
CEVF01009355
273805
Alphaproteobacteria
ACG
Arg
>WENV170469222
CEVF01095050
655623
Alphaproteobacteria
GCC
Gly
>WENV170468111
CEVF01010810
273799
Alphaproteobacteria
CCG
Arg
>WENV170469338
CEVF01107345
218220
Alphaproteobacteria
>WENV170468752
CEVF01057237
46035
Alphaproteobacteria
GGA
Ser
>WENV170469544
CEVF01123103
277700
Alphaproteobacteria
GTG
His
>WENV170468212
CEVF01017929
277700
Alphaproteobacteria
GTG
His
>WENV170468846
CEVF01065846
653532
Alphaproteobacteria
GTT
Asn
>WENV170469967
CEVF01151688
455172
Alphaproteobacteria
GGC
Ala
>WENV170468258
CEVF01020169
655566
Alphaproteobacteria
GAC
Val
>WENV170468915
CEVF01070853
294326
Alphaproteobacteria
CCG
Arg
>WENV170468006
CEVF01004309
274138
Alphaproteobacteria
CAT
Met
>WENV170468834
CEVF01065145
113188
Alphaproteobacteria
GAG
Leu
>WENV170469954
CEVF01150936
113188
Alphaproteobacteria
GAG
Leu
>WENV170468863
CEVF01066624
454512
Alphaproteobacteria
CCA
Trp
>WENV170470571
CEVF01300643
275157
Alphaproteobacteria
TGG
Pro
>WENV170469754
CEVF01139759
655361
Alphaproteobacteria
GCC
Gly
>WENV170468537
CEVF01041335
274141
Alphaproteobacteria
CCT
Arg
>WENV170468206
CEVF01017450
655271
Alphaproteobacteria
GGT
Thr
>WENV170468065
CEVF01008037
655822
Alphaproteobacteria
GAC
Val
>WENV170468332
CEVF01025523
656140
Alphaproteobacteria
GAC
Val
>WENV170469878
CEVF01147672
671670
Alphaproteobacteria
CAC
Val
>WENV170469221
CEVF01095050
654685
Alphaproteobacteria
GGT
Thr
>WENV170469580
CEVF01126409
654103
Alphaproteobacteria
GAA
Phe
>WENV170468617
CEVF01048094
780039
Alphaproteobacteria
GCA
Cys
>WENV170470597
CEVF01304143
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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