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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170537435
CEWR01006552
459731
Gammaproteobacteria
GGT
Thr
>WENV170537432
CEWR01006552
454397
Gammaproteobacteria
TGT
Thr
>WENV170537505
CEWR01010642
272023
Gammaproteobacteria
GAT
Ile
>WENV170537585
CEWR01016226
180300
Gammaproteobacteria
GTA
Tyr
>WENV170537642
CEWR01019587
482757
Gammaproteobacteria
TTT
Lys
>WENV170537812
CEWR01030006
482757
Gammaproteobacteria
TTT
Lys
>WENV170537846
CEWR01033376
275485
Gammaproteobacteria
GTC
Asp
>WENV170537853
CEWR01034366
452605
Gammaproteobacteria
GGC
Ala
>WENV170537854
CEWR01034366
452604
Gammaproteobacteria
TTC
Glu
>WENV170537888
CEWR01036576
273090
Gammaproteobacteria
CCA
Trp
>WENV170537932
CEWR01040232
271464
Gammaproteobacteria
TGG
Pro
>WENV170537978
CEWR01042716
270982
Gammaproteobacteria
GAT
Ile
>WENV170538135
CEWR01056320
779641
Gammaproteobacteria
TCC
Gly
>WENV170538133
CEWR01056320
452607
Gammaproteobacteria
TGT
Thr
>WENV170538134
CEWR01056320
218041
Gammaproteobacteria
GTA
Tyr
>WENV170538138
CEWR01056483
273089
Gammaproteobacteria
ACG
Arg
>WENV170538159
CEWR01058069
459731
Gammaproteobacteria
GGT
Thr
>WENV170538185
CEWR01059588
458426
Gammaproteobacteria
TTC
Glu
>WENV170538403
CEWR01077616
218344
Gammaproteobacteria
GTA
Tyr
>WENV170538606
CEWR01098112
452602
Gammaproteobacteria
TGC
Ala
>WENV170538614
CEWR01098604
271464
Gammaproteobacteria
TGG
Pro
>WENV170538685
CEWR01106122
277966
Gammaproteobacteria
CAT
Met
>WENV170539314
CEWR01166090
276974
Gammaproteobacteria
GGG
Pro
>WENV170539405
CEWR01200391
655603
Gammaproteobacteria
GGT
Thr
>WENV170539527
CEWR01241973
454091
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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