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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180006232
FLRY01000915
5774
Gammaproteobacteria
>WENV180006279
FLRY01002455
270655
Gammaproteobacteria
CAT
Met
>WENV180006280
FLRY01002455
654721
Gammaproteobacteria
TTG
Gln
>WENV180006281
FLRY01002455
653462
Gammaproteobacteria
TTG
Gln
>WENV180006282
FLRY01002455
654721
Gammaproteobacteria
TTG
Gln
>WENV180006303
FLRY01004064
451622
Gammaproteobacteria
GGT
Thr
>WENV180006306
FLRY01004455
270668
Gammaproteobacteria
GAC
Val
>WENV180006319
FLRY01007655
270663
Gammaproteobacteria
GGG
Pro
>WENV180006350
FLRY01015817
464214
Gammaproteobacteria
GGC
Ala
>WENV180006362
FLRY01017898
179938
Gammaproteobacteria
CAA
Leu
>WENV180006373
FLRY01020461
271697
Gammaproteobacteria
GAC
Val
>WENV180006382
FLRY01022923
451616
Gammaproteobacteria
GTT
Asn
>WENV180006429
FLRY01049297
451622
Gammaproteobacteria
GGT
Thr
>WENV180006486
FLRY01077742
112377
Gammaproteobacteria
TAA
Leu
>WENV180006560
FLRY01122445
179960
Gammaproteobacteria
TAG
Leu
>WENV180006618
FLRY01154233
451634
Gammaproteobacteria
TGT
Thr
>WENV180006647
FLRY01185094
270662
Gammaproteobacteria
ACG
Arg
>WENV180006648
FLRY01185094
270662
Gammaproteobacteria
ACG
Arg
>WENV180006666
FLRY01203579
154084
Gammaproteobacteria
CAA
Leu
>WENV180006667
FLRY01203701
30299
Gammaproteobacteria
CGA
Ser
>WENV180006763
FLRY01286347
153700
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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