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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180023953
FTIF01004989
463660
Betaproteobacteria
CCA
Trp
>WENV180023928
FTIF01004381
465524
Betaproteobacteria
TGC
Ala
>WENV180024167
FTIF01111205
465524
Betaproteobacteria
TGC
Ala
>WENV180023924
FTIF01004228
282077
Betaproteobacteria
TTG
Gln
>WENV180023949
FTIF01004944
282077
Betaproteobacteria
TTG
Gln
>WENV180023962
FTIF01005241
282077
Betaproteobacteria
TTG
Gln
>WENV180024187
FTIF01169036
282077
Betaproteobacteria
TTG
Gln
>WENV180024208
FTIF01262932
282077
Betaproteobacteria
TTG
Gln
>WENV180023838
FTIF01001454
464315
Betaproteobacteria
GTT
Asn
>WENV180023840
FTIF01001466
464315
Betaproteobacteria
GTT
Asn
>WENV180023942
FTIF01004725
464315
Betaproteobacteria
GTT
Asn
>WENV180023987
FTIF01005980
464315
Betaproteobacteria
GTT
Asn
>WENV180024009
FTIF01007950
464315
Betaproteobacteria
GTT
Asn
>WENV180023892
FTIF01003478
283585
Betaproteobacteria
CAT
Met
>WENV180023986
FTIF01005701
283585
Betaproteobacteria
CAT
Met
>WENV180024046
FTIF01014702
283585
Betaproteobacteria
CAT
Met
>WENV180024060
FTIF01018963
283585
Betaproteobacteria
CAT
Met
>WENV180024190
FTIF01171278
283585
Betaproteobacteria
CAT
Met
>WENV180024137
FTIF01066906
283584
Betaproteobacteria
CAT
Met
>WENV180024090
FTIF01033733
283584
Betaproteobacteria
CAT
Met
>WENV180023982
FTIF01005435
283584
Betaproteobacteria
CAT
Met
>WENV180023858
FTIF01002064
283584
Betaproteobacteria
CAT
Met
>WENV180023772
FTIF01000162
273483
Betaproteobacteria
ACG
Arg
>WENV180024180
FTIF01145764
273483
Betaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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