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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646381
JQGR01000569
179985
Gammaproteobacteria
>WENV170646401
JQGR01001387
655112
Gammaproteobacteria
TCC
Gly
>WENV170646408
JQGR01002405
282116
Gammaproteobacteria
GAC
Val
>WENV170646409
JQGR01002729
179970
Gammaproteobacteria
CAA
Leu
>WENV170646411
JQGR01002747
454076
Gammaproteobacteria
CAT
Met
>WENV170646413
JQGR01002895
451839
Gammaproteobacteria
GTG
His
>WENV170646412
JQGR01002895
270872
Gammaproteobacteria
CCG
Arg
>WENV170646414
JQGR01002895
270823
Gammaproteobacteria
TGG
Pro
>WENV170646416
JQGR01002895
270823
Gammaproteobacteria
TGG
Pro
>WENV170646435
JQGR01004023
270822
Gammaproteobacteria
CCA
Trp
>WENV170646441
JQGR01004464
270929
Gammaproteobacteria
GAT
Ile
>WENV170646447
JQGR01006319
451784
Gammaproteobacteria
GAA
Phe
>WENV170646465
JQGR01009269
270822
Gammaproteobacteria
CCA
Trp
>WENV170646467
JQGR01009961
273702
Gammaproteobacteria
GAT
Ile
>WENV170646476
JQGR01011892
273699
Gammaproteobacteria
CAT
Met
>WENV170646477
JQGR01011892
180152
Gammaproteobacteria
TAG
Leu
>WENV170646481
JQGR01012682
451780
Gammaproteobacteria
GCC
Gly
>WENV170646487
JQGR01014070
655112
Gammaproteobacteria
TCC
Gly
>WENV170646488
JQGR01014145
451784
Gammaproteobacteria
GAA
Phe
>WENV170646500
JQGR01015643
451784
Gammaproteobacteria
GAA
Phe
>WENV170646513
JQGR01018017
451780
Gammaproteobacteria
GCC
Gly
>WENV170646514
JQGR01018067
454091
Gammaproteobacteria
GGC
Ala
>WENV170646517
JQGR01019580
112665
Gammaproteobacteria
TAA
Leu
>WENV170646518
JQGR01019596
179985
Gammaproteobacteria
>WENV170646519
JQGR01019657
451780
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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