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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704778
LLEN01000008
454091
Gammaproteobacteria
GGC
Ala
>WENV170704782
LLEN01000016
270822
Gammaproteobacteria
CCA
Trp
>WENV170704786
LLEN01000024
270872
Gammaproteobacteria
CCG
Arg
>WENV170704787
LLEN01000024
451782
Gammaproteobacteria
GTG
His
>WENV170704788
LLEN01000024
270823
Gammaproteobacteria
TGG
Pro
>WENV170704789
LLEN01000024
451782
Gammaproteobacteria
GTG
His
>WENV170704790
LLEN01000024
270823
Gammaproteobacteria
TGG
Pro
>WENV170704791
LLEN01000030
86880
Gammaproteobacteria
GGA
Ser
>WENV170704792
LLEN01000033
779672
Gammaproteobacteria
GCA
Cys
>WENV170704793
LLEN01000033
779672
Gammaproteobacteria
GCA
Cys
>WENV170704795
LLEN01000076
451785
Gammaproteobacteria
GAA
Phe
>WENV170704797
LLEN01000080
32658
Gammaproteobacteria
TGA
Ser
>WENV170704801
LLEN01000119
86880
Gammaproteobacteria
GGA
Ser
>WENV170704807
LLEN01000228
779672
Gammaproteobacteria
GCA
Cys
>WENV170704808
LLEN01000228
455425
Gammaproteobacteria
GCC
Gly
>WENV170704809
LLEN01000228
112293
Gammaproteobacteria
TAA
Leu
>WENV170704811
LLEN01000316
32658
Gammaproteobacteria
TGA
Ser
>WENV170704813
LLEN01000533
19867
Gammaproteobacteria
GCT
Ser
>WENV170704819
LLEN01000607
273099
Gammaproteobacteria
GAT
Ile
>WENV170704821
LLEN01000725
456511
Gammaproteobacteria
GAA
Phe
>WENV170704824
LLEN01001017
454095
Gammaproteobacteria
GTG
His
>WENV170704828
LLEN01001433
273090
Gammaproteobacteria
CCA
Trp
>WENV170704831
LLEN01001976
451785
Gammaproteobacteria
GAA
Phe
>WENV170704832
LLEN01002047
270822
Gammaproteobacteria
CCA
Trp
>WENV170704833
LLEN01002502
30846
Gammaproteobacteria
TGA
Ser
>WENV170704852
LLEN01003846
277043
Gammaproteobacteria
ACG
Arg
>WENV170704853
LLEN01004193
277479
Gammaproteobacteria
CAT
Met
>WENV170704857
LLEN01004610
49705
Gammaproteobacteria
GGA
Ser
>WENV170704865
LLEN01005327
274865
Gammaproteobacteria
ACG
Arg
>WENV170704866
LLEN01005327
274864
Gammaproteobacteria
ACG
Arg
>WENV170704867
LLEN01005327
274865
Gammaproteobacteria
ACG
Arg
>WENV170704873
LLEN01007071
452881
Gammaproteobacteria
TGT
Thr
>WENV170704874
LLEN01007653
482757
Gammaproteobacteria
TTT
Lys
>WENV170704875
LLEN01007671
273092
Gammaproteobacteria
GGG
Pro
>WENV170704888
LLEN01009538
274865
Gammaproteobacteria
ACG
Arg
>WENV170704889
LLEN01009538
274864
Gammaproteobacteria
ACG
Arg
>WENV170704890
LLEN01009538
19867
Gammaproteobacteria
GCT
Ser
>WENV170704896
LLEN01010617
180152
Gammaproteobacteria
TAG
Leu
>WENV170704897
LLEN01010617
653554
Gammaproteobacteria
TTG
Gln
>WENV170704904
LLEN01012124
180152
Gammaproteobacteria
TAG
Leu
>WENV170704906
LLEN01012464
458747
Gammaproteobacteria
GGT
Thr
>WENV170704908
LLEN01013613
454096
Gammaproteobacteria
GCC
Gly
>WENV170704922
LLEN01015598
273702
Gammaproteobacteria
GAT
Ile
>WENV170704925
LLEN01015804
451920
Gammaproteobacteria
GGT
Thr
>WENV170704935
LLEN01018519
451785
Gammaproteobacteria
GAA
Phe
>WENV170704941
LLEN01019822
463602
Gammaproteobacteria
TTT
Lys
>WENV170704942
LLEN01019822
454814
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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