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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180043274
LQAH01019669
273797
Alphaproteobacteria
GGG
Pro
>WENV180043336
LQAH01031889
452917
Alphaproteobacteria
TAC
Val
>WENV180043070
LQAH01001055
655167
Alphaproteobacteria
TTC
Glu
>WENV180043080
LQAH01001495
275667
Alphaproteobacteria
TGG
Pro
>WENV180043087
LQAH01001742
655359
Alphaproteobacteria
GAC
Val
>WENV180043216
LQAH01011042
456891
Alphaproteobacteria
CGT
Thr
>WENV180043091
LQAH01001857
274131
Alphaproteobacteria
CAT
Met
>WENV180043250
LQAH01015870
274131
Alphaproteobacteria
CAT
Met
>WENV180043276
LQAH01020010
274133
Alphaproteobacteria
ACG
Arg
>WENV180043247
LQAH01014882
780582
Alphaproteobacteria
TCC
Gly
>WENV180043349
LQAH01034132
275152
Alphaproteobacteria
TCT
Arg
>WENV180043102
LQAH01002158
654103
Alphaproteobacteria
GAA
Phe
>WENV180043179
LQAH01007078
654103
Alphaproteobacteria
GAA
Phe
>WENV180043285
LQAH01022362
46069
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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