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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170765487
LWDU01037652
457453
Gammaproteobacteria
TTT
Lys
>WENV170764684
LWDU01033254
271464
Gammaproteobacteria
TGG
Pro
>WENV170765131
LWDU01035160
271464
Gammaproteobacteria
TGG
Pro
>WENV170765190
LWDU01035499
271464
Gammaproteobacteria
TGG
Pro
>WENV170763585
LWDU01013282
270982
Gammaproteobacteria
GAT
Ile
>WENV170763752
LWDU01018816
270982
Gammaproteobacteria
GAT
Ile
>WENV170764688
LWDU01033255
270982
Gammaproteobacteria
GAT
Ile
>WENV170765169
LWDU01035259
270982
Gammaproteobacteria
GAT
Ile
>WENV170765200
LWDU01035510
272023
Gammaproteobacteria
GAT
Ile
>WENV170765231
LWDU01035978
87529
Gammaproteobacteria
GGA
Ser
>WENV170766558
LWDU01042035
452413
Gammaproteobacteria
GGC
Ala
>WENV170763498
LWDU01011110
452413
Gammaproteobacteria
GGC
Ala
>WENV170763728
LWDU01017996
454388
Gammaproteobacteria
TAC
Val
>WENV170766233
LWDU01041016
454388
Gammaproteobacteria
TAC
Val
>WENV170764099
LWDU01030223
281115
Gammaproteobacteria
GAT
Ile
>WENV170765506
LWDU01037674
451982
Gammaproteobacteria
GGC
Ala
>WENV170765492
LWDU01037657
276185
Gammaproteobacteria
TGG
Pro
>WENV170765237
LWDU01036031
276185
Gammaproteobacteria
TGG
Pro
>WENV170764122
LWDU01030945
272104
Gammaproteobacteria
CGG
Pro
>WENV170762821
LWDU01000016
272104
Gammaproteobacteria
CGG
Pro
>WENV170763138
LWDU01002700
113284
Gammaproteobacteria
CAG
Leu
>WENV170763931
LWDU01024916
273327
Gammaproteobacteria
ACG
Arg
>WENV170766217
LWDU01040999
273327
Gammaproteobacteria
ACG
Arg
>WENV170766526
LWDU01041943
273327
Gammaproteobacteria
ACG
Arg
>WENV170766591
LWDU01042187
459731
Gammaproteobacteria
GGT
Thr
>WENV170765199
LWDU01035510
459731
Gammaproteobacteria
GGT
Thr
>WENV170764695
LWDU01033255
459731
Gammaproteobacteria
GGT
Thr
>WENV170763163
LWDU01003272
459731
Gammaproteobacteria
GGT
Thr
>WENV170766493
LWDU01041789
458525
Gammaproteobacteria
TAC
Val
>WENV170766520
LWDU01041936
458525
Gammaproteobacteria
TAC
Val
>WENV170765507
LWDU01037674
459479
Gammaproteobacteria
TTC
Glu
>WENV170764005
LWDU01027101
271613
Gammaproteobacteria
GTC
Asp
>WENV170766564
LWDU01042046
461062
Gammaproteobacteria
CCA
Trp
>WENV170765234
LWDU01036015
457459
Gammaproteobacteria
GGC
Ala
>WENV170765515
LWDU01037696
453897
Gammaproteobacteria
TAC
Val
>WENV170763160
LWDU01003272
454397
Gammaproteobacteria
TGT
Thr
>WENV170767052
LWDU01044225
466510
Gammaproteobacteria
GCC
Gly
>WENV170766771
LWDU01042675
466510
Gammaproteobacteria
GCC
Gly
>WENV170766698
LWDU01042450
466510
Gammaproteobacteria
GCC
Gly
>WENV170763549
LWDU01012163
466510
Gammaproteobacteria
GCC
Gly
>WENV170763305
LWDU01006478
466510
Gammaproteobacteria
GCC
Gly
>WENV170763237
LWDU01004935
466510
Gammaproteobacteria
GCC
Gly
>WENV170765230
LWDU01035958
452407
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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