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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779625
LZQQ01000450
793351
Gammaproteobacteria
GCA
Cys
>WENV170779615
LZQQ01000330
277479
Gammaproteobacteria
CAT
Met
>WENV170779596
LZQQ01000142
270982
Gammaproteobacteria
GAT
Ile
>WENV170779588
LZQQ01000073
319301
Gammaproteobacteria
ACG
Arg
>WENV170779678
LZQQ01002043
452413
Gammaproteobacteria
GGC
Ala
>WENV170779645
LZQQ01000816
491182
Gammaproteobacteria
GTG
His
>WENV170779567
LZQQ01000012
275519
Gammaproteobacteria
CAT
Met
>WENV170779674
LZQQ01001768
319299
Gammaproteobacteria
CCA
Trp
>WENV170779614
LZQQ01000330
687155
Gammaproteobacteria
TTG
Gln
>WENV170779564
LZQQ01000010
451876
Gammaproteobacteria
GTG
His
>WENV170779672
LZQQ01001731
451876
Gammaproteobacteria
GTG
His
>WENV170779655
LZQQ01000980
451869
Gammaproteobacteria
GGT
Thr
>WENV170779584
LZQQ01000068
490063
Gammaproteobacteria
TAC
Val
>WENV170779662
LZQQ01001134
271200
Gammaproteobacteria
CAT
Met
>WENV170779556
LZQQ01000002
270906
Gammaproteobacteria
CCG
Arg
>WENV170779651
LZQQ01000939
306408
Gammaproteobacteria
CAT
Met
>WENV170779629
LZQQ01000501
452908
Gammaproteobacteria
TTT
Lys
>WENV170779642
LZQQ01000776
270905
Gammaproteobacteria
CCG
Arg
>WENV170779616
LZQQ01000367
457459
Gammaproteobacteria
GGC
Ala
>WENV170779617
LZQQ01000367
491021
Gammaproteobacteria
TTC
Glu
>WENV170779626
LZQQ01000450
122618
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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