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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170878204
MDTC01071963
275828
Alphaproteobacteria
GTC
Asp
>WENV170883924
MDTC01175355
273797
Alphaproteobacteria
GGG
Pro
>WENV170884262
MDTC01180776
273797
Alphaproteobacteria
GGG
Pro
>WENV170878177
MDTC01071444
180489
Alphaproteobacteria
TAG
Leu
>WENV170881926
MDTC01140111
655167
Alphaproteobacteria
TTC
Glu
>WENV170878053
MDTC01069361
452884
Alphaproteobacteria
CCA
Trp
>WENV170883918
MDTC01175239
452884
Alphaproteobacteria
CCA
Trp
>WENV170889631
MDTC01277838
452884
Alphaproteobacteria
CCA
Trp
>WENV170886355
MDTC01220105
273905
Alphaproteobacteria
TGG
Pro
>WENV170878932
MDTC01086356
46190
Alphaproteobacteria
GGA
Ser
>WENV170884334
MDTC01182050
218220
Alphaproteobacteria
>WENV170888654
MDTC01261522
656001
Alphaproteobacteria
GCC
Gly
>WENV170876305
MDTC01037895
218119
Alphaproteobacteria
>WENV170882099
MDTC01143594
653532
Alphaproteobacteria
GTT
Asn
>WENV170884060
MDTC01177446
653532
Alphaproteobacteria
GTT
Asn
>WENV170886134
MDTC01215242
273451
Alphaproteobacteria
GTG
His
>WENV170878824
MDTC01084177
655566
Alphaproteobacteria
GAC
Val
>WENV170881179
MDTC01126655
294326
Alphaproteobacteria
CCG
Arg
>WENV170889394
MDTC01274150
454059
Alphaproteobacteria
TTT
Lys
>WENV170889073
MDTC01268947
454059
Alphaproteobacteria
TTT
Lys
>WENV170887542
MDTC01241436
454059
Alphaproteobacteria
TTT
Lys
>WENV170880132
MDTC01107170
454059
Alphaproteobacteria
TTT
Lys
>WENV170885457
MDTC01202461
274223
Alphaproteobacteria
CCG
Arg
>WENV170883801
MDTC01172769
113188
Alphaproteobacteria
GAG
Leu
>WENV170886574
MDTC01223737
113418
Alphaproteobacteria
CAG
Leu
>WENV170879655
MDTC01098770
282325
Alphaproteobacteria
GTC
Asp
>WENV170887788
MDTC01246077
273603
Alphaproteobacteria
TGG
Pro
>WENV170878884
MDTC01085765
454504
Alphaproteobacteria
CAT
Met
>WENV170879222
MDTC01091246
656140
Alphaproteobacteria
GAC
Val
>WENV170886586
MDTC01223893
780582
Alphaproteobacteria
TCC
Gly
>WENV170883684
MDTC01170470
454914
Alphaproteobacteria
TTT
Lys
>WENV170880112
MDTC01106652
275989
Alphaproteobacteria
CAT
Met
>WENV170882012
MDTC01141911
658005
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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