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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180082769
MPMC02256470
452757
Alphaproteobacteria
CAT
Met
>WENV180082172
MPMC02192511
455172
Alphaproteobacteria
GGC
Ala
>WENV180081475
MPMC02119762
654017
Alphaproteobacteria
TGT
Thr
>WENV180081201
MPMC02094647
452753
Alphaproteobacteria
GAA
Phe
>WENV180082818
MPMC02261410
655358
Alphaproteobacteria
TTG
Gln
>WENV180082441
MPMC02222501
46072
Alphaproteobacteria
GCT
Ser
>WENV180081786
MPMC02149785
270799
Alphaproteobacteria
CAT
Met
>WENV180082102
MPMC02185012
452755
Alphaproteobacteria
TAC
Val
>WENV180080876
MPMC02062171
112429
Alphaproteobacteria
GAG
Leu
>WENV180080873
MPMC02061713
112839
Alphaproteobacteria
CAG
Leu
>WENV180082233
MPMC02198796
780039
Alphaproteobacteria
GCA
Cys
>WENV180082429
MPMC02222099
301138
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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