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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1002895
SRR002326.83214
456864
Bacteroidota
CAT
Met
>SRA1003437
SRR002326.464531
653799
Bacteroidota
TTC
Glu
>SRA1003481
SRR002326.493645
271276
Bacteroidota
CAT
Met
>SRA1003406
SRR002326.440563
271276
Bacteroidota
CAT
Met
>SRA1003374
SRR002326.417812
271276
Bacteroidota
CAT
Met
>SRA1003245
SRR002326.336244
271276
Bacteroidota
CAT
Met
>SRA1002988
SRR002326.139913
271276
Bacteroidota
CAT
Met
>SRA1003309
SRR002326.381338
90173
Bacteroidota
TAA
Leu
>SRA1003134
SRR002326.232129
321096
Bacteroidota
CAT
Met
>SRA1002986
SRR002326.137698
457188
Bacteroidota
GCC
Gly
>SRA1003485
SRR002326.496787
297979
Bacteroidota
GTT
Asn
>SRA1002882
SRR002326.72313
241622
Bacteroidota
TAC
Val
>SRA1003310
SRR002326.382100
218695
Bacteroidota
GTA
Tyr
>SRA1002886
SRR002326.74406
218695
Bacteroidota
GTA
Tyr
>SRA1002786
SRR002326.15083
462022
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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