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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11102034
AGFT01052851
411593
Gammaproteobacteria
CCC
Gly
>WENV170001962
AGFT01052851
411593
Gammaproteobacteria
CCC
Gly
>WENV11102066
AGFT01064463
23626
Gammaproteobacteria
TGA
Ser
>WENV170001994
AGFT01064463
23626
Gammaproteobacteria
TGA
Ser
>WENV170002021
AGFT01073816
152135
Gammaproteobacteria
GAC
Val
>WENV170002103
AGFT01114788
98141
Gammaproteobacteria
TAG
Leu
>WENV11102005
AGFT01044574
238941
Gammaproteobacteria
>WENV170001933
AGFT01044574
238941
Gammaproteobacteria
>WENV11102109
AGFT01080948
235915
Gammaproteobacteria
TGT
Thr
>WENV170002037
AGFT01080948
235915
Gammaproteobacteria
TGT
Thr
>WENV11101922
AGFT01008650
340346
Gammaproteobacteria
>WENV11102110
AGFT01080993
340346
Gammaproteobacteria
>WENV11101929
AGFT01011487
145364
Gammaproteobacteria
GGG
Pro
>WENV11101935
AGFT01014640
145364
Gammaproteobacteria
GGG
Pro
>WENV11102072
AGFT01066831
145364
Gammaproteobacteria
GGG
Pro
>WENV11102111
AGFT01081832
145364
Gammaproteobacteria
GGG
Pro
>WENV11102121
AGFT01085201
145364
Gammaproteobacteria
GGG
Pro
>WENV11102155
AGFT01106489
145364
Gammaproteobacteria
GGG
Pro
>WENV11102189
AGFT01119502
145364
Gammaproteobacteria
GGG
Pro
>WENV11102203
AGFT01123556
145364
Gammaproteobacteria
GGG
Pro
>WENV170002039
AGFT01081832
145364
Gammaproteobacteria
GGG
Pro
>WENV170002049
AGFT01085201
145364
Gammaproteobacteria
GGG
Pro
>WENV11102120
AGFT01084686
80994
Gammaproteobacteria
CAG
Leu
>WENV170002048
AGFT01084686
80994
Gammaproteobacteria
CAG
Leu
>WENV11102028
AGFT01049936
412505
Gammaproteobacteria
GCA
Cys
>WENV170001956
AGFT01049936
412505
Gammaproteobacteria
GCA
Cys
>WENV11102054
AGFT01058818
411729
Gammaproteobacteria
>WENV170002147
AGFT01128775
144979
Gammaproteobacteria
CGG
Pro
>WENV11102219
AGFT01128775
144979
Gammaproteobacteria
CGG
Pro
>WENV11102190
AGFT01119619
151826
Gammaproteobacteria
TCT
Arg
>WENV170002118
AGFT01119619
151826
Gammaproteobacteria
TCT
Arg
>WENV11102022
AGFT01048301
412278
Gammaproteobacteria
GCA
Cys
>WENV11102074
AGFT01067016
238446
Gammaproteobacteria
>WENV170002002
AGFT01067016
238446
Gammaproteobacteria
>WENV11101978
AGFT01036660
340812
Gammaproteobacteria
TTG
Gln
>WENV11102093
AGFT01073816
147009
Gammaproteobacteria
GAC
Val
>WENV11102084
AGFT01071632
95704
Gammaproteobacteria
GTA
Tyr
>WENV11102154
AGFT01106299
95704
Gammaproteobacteria
GTA
Tyr
>WENV11102164
AGFT01110679
95704
Gammaproteobacteria
GTA
Tyr
>WENV170002012
AGFT01071632
95704
Gammaproteobacteria
GTA
Tyr
>WENV170002082
AGFT01106299
95704
Gammaproteobacteria
GTA
Tyr
>WENV170002092
AGFT01110679
95704
Gammaproteobacteria
GTA
Tyr
>WENV11102060
AGFT01060662
237462
Gammaproteobacteria
GTG
His
>WENV170001988
AGFT01060662
237462
Gammaproteobacteria
GTG
His
>WENV170001850
AGFT01008650
342830
Gammaproteobacteria
>WENV170002038
AGFT01080993
342830
Gammaproteobacteria
>WENV11102125
AGFT01087873
238307
Gammaproteobacteria
GAA
Phe
>WENV170002053
AGFT01087873
238307
Gammaproteobacteria
GAA
Phe
>WENV170001857
AGFT01011487
159244
Gammaproteobacteria
GGG
Pro
>WENV170001863
AGFT01014640
159244
Gammaproteobacteria
GGG
Pro
>WENV170002000
AGFT01066831
159244
Gammaproteobacteria
GGG
Pro
>WENV170002083
AGFT01106489
159244
Gammaproteobacteria
GGG
Pro
>WENV170002117
AGFT01119502
159244
Gammaproteobacteria
GGG
Pro
>WENV170002131
AGFT01123556
159244
Gammaproteobacteria
GGG
Pro
>WENV11102023
AGFT01048301
58862
Gammaproteobacteria
TAA
Leu
>WENV170001951
AGFT01048301
58862
Gammaproteobacteria
TAA
Leu
>WENV11102106
AGFT01080885
412476
Gammaproteobacteria
TCC
Gly
>WENV170001982
AGFT01058818
413604
Gammaproteobacteria
GCA
Cys
>WENV11102165
AGFT01111150
44871
Gammaproteobacteria
TGA
Ser
>WENV170002093
AGFT01111150
44871
Gammaproteobacteria
TGA
Ser
>WENV170001950
AGFT01048301
413554
Gammaproteobacteria
GCA
Cys
>WENV11101981
AGFT01036941
340341
Gammaproteobacteria
TCC
Gly
>WENV11101999
AGFT01042631
340341
Gammaproteobacteria
TCC
Gly
>WENV11102008
AGFT01044904
340341
Gammaproteobacteria
TCC
Gly
>WENV11102069
AGFT01065639
340341
Gammaproteobacteria
TCC
Gly
>WENV11102096
AGFT01075825
340341
Gammaproteobacteria
TCC
Gly
>WENV170001936
AGFT01044904
340341
Gammaproteobacteria
TCC
Gly
>WENV11102248
AGFT01139401
341771
Gammaproteobacteria
>WENV170002176
AGFT01139401
341771
Gammaproteobacteria
>WENV11101948
AGFT01018760
240182
Gammaproteobacteria
TTT
Lys
>WENV11102141
AGFT01100789
240182
Gammaproteobacteria
TTT
Lys
>WENV11102150
AGFT01104804
240182
Gammaproteobacteria
TTT
Lys
>WENV11102241
AGFT01134565
240182
Gammaproteobacteria
TTT
Lys
>WENV170001876
AGFT01018760
240182
Gammaproteobacteria
TTT
Lys
>WENV170002069
AGFT01100789
240182
Gammaproteobacteria
TTT
Lys
>WENV170002078
AGFT01104804
240182
Gammaproteobacteria
TTT
Lys
>WENV170002169
AGFT01134565
240182
Gammaproteobacteria
TTT
Lys
>WENV11102246
AGFT01137519
144800
Gammaproteobacteria
>WENV170002032
AGFT01079771
147159
Gammaproteobacteria
>WENV11102104
AGFT01079771
147159
Gammaproteobacteria
>WENV170002119
AGFT01119967
96065
Gammaproteobacteria
TAG
Leu
>WENV11102191
AGFT01119967
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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