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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV084321
BAAZ01012831
16815
Bacillota
TGA
Ser
>WENV084277
BAAZ01009487
156189
Bacillota
GAT
Ile
>WENV084392
BAAZ01022293
156189
Bacillota
GAT
Ile
>WENV084379
BAAZ01021131
235154
Bacillota
GTT
Asn
>WENV084383
BAAZ01021440
235154
Bacillota
GTT
Asn
>WENV084256
BAAZ01007936
147691
Bacillota
GAT
Ile
>WENV084237
BAAZ01006101
246023
Bacillota
TGC
Ala
>WENV084167
BAAZ01002504
235150
Bacillota
TGC
Ala
>WENV084414
BAAZ01024930
413574
Bacillota
CTG
Gln
>WENV084228
BAAZ01004923
235137
Bacillota
TGC
Ala
>WENV084177
BAAZ01002868
235294
Bacillota
TGC
Ala
>WENV084452
BAAZ01031127
235294
Bacillota
TGC
Ala
>WENV084330
BAAZ01015412
338143
Bacillota
CTC
Glu
>WENV084264
BAAZ01008632
144668
Bacillota
GTC
Asp
>WENV084249
BAAZ01007285
235091
Bacillota
CTT
Lys
>WENV084363
BAAZ01020122
235117
Bacillota
TAC
Val
>WENV084365
BAAZ01020122
235079
Bacillota
GAA
Phe
>WENV084250
BAAZ01007285
338149
Bacillota
CTC
Glu
>WENV084293
BAAZ01010276
254697
Bacillota
TTT
Lys
>WENV084071
BAAZ01000066
235095
Bacillota
GGT
Thr
>WENV084259
BAAZ01008148
235095
Bacillota
GGT
Thr
>WENV084341
BAAZ01017246
235638
Bacillota
GAA
Phe
>WENV084252
BAAZ01007869
235124
Bacillota
TGG
Pro
>WENV084083
BAAZ01000132
345314
Bacillota
TTG
Gln
>WENV084161
BAAZ01002344
237288
Bacillota
CCA
Trp
>WENV084362
BAAZ01020122
249259
Bacillota
GCC
Gly
>WENV084366
BAAZ01020122
249259
Bacillota
GCC
Gly
>WENV084449
BAAZ01030884
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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