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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170020214
BBPE01004256
152292
Betaproteobacteria
TTG
Gln
>WENV170019741
BBPE01000386
145694
Betaproteobacteria
ACG
Arg
>WENV170019805
BBPE01000690
145694
Betaproteobacteria
ACG
Arg
>WENV170019832
BBPE01000851
145694
Betaproteobacteria
ACG
Arg
>WENV170020106
BBPE01002921
154789
Betaproteobacteria
CAT
Met
>WENV170020189
BBPE01003916
172608
Betaproteobacteria
TTG
Gln
>WENV170020307
BBPE01005589
59352
Betaproteobacteria
TAG
Leu
>WENV170020309
BBPE01005589
412167
Betaproteobacteria
GCA
Cys
>WENV170019950
BBPE01001759
85133
Betaproteobacteria
GTA
Tyr
>WENV170020088
BBPE01002819
85133
Betaproteobacteria
GTA
Tyr
>WENV170019919
BBPE01001437
99249
Betaproteobacteria
CAA
Leu
>WENV170019941
BBPE01001705
301533
Betaproteobacteria
GTG
His
>WENV170019833
BBPE01000852
199861
Betaproteobacteria
CAT
Met
>WENV170019716
BBPE01000213
292518
Betaproteobacteria
TTT
Lys
>WENV170019943
BBPE01001705
146726
Betaproteobacteria
TCT
Arg
>WENV170020095
BBPE01002888
270881
Betaproteobacteria
TGT
Thr
>WENV170019874
BBPE01001123
154591
Betaproteobacteria
CAT
Met
>WENV170019901
BBPE01001298
154591
Betaproteobacteria
CAT
Met
>WENV170019902
BBPE01001299
154591
Betaproteobacteria
CAT
Met
>WENV170019918
BBPE01001437
235457
Betaproteobacteria
CGT
Thr
>WENV170019828
BBPE01000816
237326
Betaproteobacteria
CTT
Lys
>WENV170019895
BBPE01001231
147666
Betaproteobacteria
CAT
Met
>WENV170019923
BBPE01001486
239140
Betaproteobacteria
TTT
Lys
>WENV170020587
BBPE01013175
239140
Betaproteobacteria
TTT
Lys
>WENV170019976
BBPE01002017
417724
Betaproteobacteria
CCC
Gly
>WENV170019767
BBPE01000622
185916
Betaproteobacteria
CAT
Met
>WENV170019838
BBPE01000936
185916
Betaproteobacteria
CAT
Met
>WENV170020046
BBPE01002436
185916
Betaproteobacteria
CAT
Met
>WENV170019808
BBPE01000709
105933
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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