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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170023708
BCQL01001450
366446
Actinomycetota
GCA
Cys
>WENV170024625
BCQL01086603
148377
Actinomycetota
CGG
Pro
>WENV170023662
BCQL01001014
385600
Actinomycetota
GCC
Gly
>WENV170024319
BCQL01042158
338295
Actinomycetota
GCA
Cys
>WENV170024476
BCQL01065050
80643
Actinomycetota
CAG
Leu
>WENV170024098
BCQL01019593
145064
Actinomycetota
TGG
Pro
>WENV170023639
BCQL01000543
237745
Actinomycetota
CCG
Arg
>WENV170023703
BCQL01001397
279688
Actinomycetota
CCA
Trp
>WENV170024450
BCQL01062489
279688
Actinomycetota
CCA
Trp
>WENV170024326
BCQL01043056
151791
Actinomycetota
CAA
Leu
>WENV170024259
BCQL01034698
267741
Actinomycetota
CCT
Arg
>WENV170024106
BCQL01020484
269803
Actinomycetota
CGC
Ala
>WENV170024266
BCQL01035725
91637
Actinomycetota
CAG
Leu
>WENV170023790
BCQL01003622
168368
Actinomycetota
GAA
Phe
>WENV170023829
BCQL01005354
411674
Actinomycetota
TTG
Gln
>WENV170023926
BCQL01009966
411674
Actinomycetota
TTG
Gln
>WENV170024421
BCQL01057760
411674
Actinomycetota
TTG
Gln
>WENV170023879
BCQL01007469
235444
Actinomycetota
TGC
Ala
>WENV170023940
BCQL01010648
235444
Actinomycetota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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