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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170024779
BCQL01124335
126974
Bacteroidota
TAC
Val
>WENV170024905
BCQL01155913
126974
Bacteroidota
TAC
Val
>WENV170024399
BCQL01053745
237364
Bacteroidota
TCC
Gly
>WENV170024806
BCQL01132201
139286
Bacteroidota
TGG
Pro
>WENV170025125
BCQL01224076
139286
Bacteroidota
TGG
Pro
>WENV170025397
BCQL01315105
139286
Bacteroidota
TGG
Pro
>WENV170024595
BCQL01081504
237360
Bacteroidota
TTT
Lys
>WENV170024596
BCQL01081504
237360
Bacteroidota
TTT
Lys
>WENV170025443
BCQL01339251
237360
Bacteroidota
TTT
Lys
>WENV170024605
BCQL01083284
361294
Bacteroidota
GGT
Thr
>WENV170024369
BCQL01048728
238765
Bacteroidota
GCC
Gly
>WENV170024457
BCQL01063271
126691
Bacteroidota
TGG
Pro
>WENV170024444
BCQL01061856
187493
Bacteroidota
GGC
Ala
>WENV170024202
BCQL01029938
60261
Bacteroidota
TAA
Leu
>WENV170024720
BCQL01109150
100198
Bacteroidota
TAG
Leu
>WENV170024023
BCQL01015698
322068
Bacteroidota
TCC
Gly
>WENV170024448
BCQL01062291
238764
Bacteroidota
>WENV170025211
BCQL01256329
238764
Bacteroidota
>WENV170024140
BCQL01023145
242524
Bacteroidota
GCC
Gly
>WENV170024509
BCQL01070343
242524
Bacteroidota
GCC
Gly
>WENV170024510
BCQL01070343
242524
Bacteroidota
GCC
Gly
>WENV170024511
BCQL01070343
242524
Bacteroidota
GCC
Gly
>WENV170024513
BCQL01070343
242524
Bacteroidota
GCC
Gly
>WENV170024250
BCQL01033081
44938
Bacteroidota
TGA
Ser
>WENV170025187
BCQL01245895
235935
Bacteroidota
TCC
Gly
>WENV170024749
BCQL01115788
235802
Bacteroidota
CAT
Met
>WENV170025422
BCQL01329569
235802
Bacteroidota
CAT
Met
>WENV170024822
BCQL01136746
152188
Bacteroidota
GGC
Ala
>WENV170024481
BCQL01066731
58832
Bacteroidota
TAA
Leu
>WENV170023808
BCQL01004335
153768
Bacteroidota
TGC
Ala
>WENV170024579
BCQL01078273
145405
Bacteroidota
GTC
Asp
>WENV170024201
BCQL01029938
342807
Bacteroidota
GCC
Gly
>WENV170024531
BCQL01071300
193473
Bacteroidota
GTC
Asp
>WENV170025124
BCQL01224076
13120
Bacteroidota
GCT
Ser
>WENV170024323
BCQL01042599
119524
Bacteroidota
CAA
Leu
>WENV170024022
BCQL01015698
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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