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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170050830
CDZB01044293
155958
Bacillota
GAT
Ile
>WENV170050361
CDZB01023486
158247
Bacillota
>WENV170051621
CDZB01075844
148239
Bacillota
TCT
Arg
>WENV170049884
CDZB01005838
235154
Bacillota
GTT
Asn
>WENV170050262
CDZB01020812
59312
Bacillota
CAG
Leu
>WENV170051300
CDZB01063394
155273
Bacillota
CAT
Met
>WENV170051305
CDZB01063431
345329
Bacillota
TTC
Glu
>WENV170050730
CDZB01039327
44859
Bacillota
AAG
Leu
>WENV170050519
CDZB01030480
274189
Bacillota
TGT
Thr
>WENV170050915
CDZB01047974
274189
Bacillota
TGT
Thr
>WENV170051187
CDZB01058140
274189
Bacillota
TGT
Thr
>WENV170051509
CDZB01071512
274189
Bacillota
TGT
Thr
>WENV170051427
CDZB01068156
173314
Bacillota
GAT
Ile
>WENV170050242
CDZB01019597
37269
Bacillota
TGA
Ser
>WENV170051297
CDZB01063332
37269
Bacillota
TGA
Ser
>WENV170050196
CDZB01017640
287000
Bacillota
GTT
Asn
>WENV170051766
CDZB01081262
287000
Bacillota
GTT
Asn
>WENV170050469
CDZB01027846
169968
Bacillota
CAT
Met
>WENV170050811
CDZB01043056
152149
Bacillota
GTG
His
>WENV170050140
CDZB01015683
144599
Bacillota
GTC
Asp
>WENV170051265
CDZB01062102
235078
Bacillota
TAC
Val
>WENV170049848
CDZB01003853
100326
Bacillota
GTA
Tyr
>WENV170050143
CDZB01015683
100326
Bacillota
GTA
Tyr
>WENV170051622
CDZB01075844
144610
Bacillota
GTG
His
>WENV170051416
CDZB01067595
263765
Bacillota
TAC
Val
>WENV170051601
CDZB01075764
263765
Bacillota
TAC
Val
>WENV170051618
CDZB01075844
185292
Bacillota
ACG
Arg
>WENV170050878
CDZB01046337
338410
Bacillota
TTC
Glu
>WENV170051462
CDZB01069585
256380
Bacillota
>WENV170050101
CDZB01014436
163943
Bacillota
GTC
Asp
>WENV170050979
CDZB01050487
163943
Bacillota
GTC
Asp
>WENV170050319
CDZB01022128
249522
Bacillota
TAC
Val
>WENV170051022
CDZB01052234
249522
Bacillota
TAC
Val
>WENV170050831
CDZB01044398
254433
Bacillota
TAC
Val
>WENV170050549
CDZB01031780
157838
Bacillota
GTC
Asp
>WENV170050818
CDZB01044027
247734
Bacillota
TGC
Ala
>WENV170051570
CDZB01073694
247734
Bacillota
TGC
Ala
>WENV170049850
CDZB01003853
238974
Bacillota
GAA
Phe
>WENV170050145
CDZB01015683
238974
Bacillota
GAA
Phe
>WENV170051670
CDZB01077647
245296
Bacillota
CCC
Gly
>WENV170050258
CDZB01020505
248965
Bacillota
GCC
Gly
>WENV170050093
CDZB01013823
95563
Bacillota
GTA
Tyr
>WENV170050470
CDZB01027846
272488
Bacillota
GAA
Phe
>WENV170050552
CDZB01031863
272488
Bacillota
GAA
Phe
>WENV170050564
CDZB01032810
272488
Bacillota
GAA
Phe
>WENV170049852
CDZB01003853
238945
Bacillota
GCC
Gly
>WENV170051060
CDZB01053553
238945
Bacillota
GCC
Gly
>WENV170049999
CDZB01010478
273862
Bacillota
TGC
Ala
>WENV170050802
CDZB01043033
338330
Bacillota
GCA
Cys
>WENV170050175
CDZB01016933
338128
Bacillota
TTC
Glu
>WENV170051390
CDZB01066900
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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