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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170151823
CEOE01000227
368245
Alphaproteobacteria
>WENV170151841
CEOE01002492
252375
Alphaproteobacteria
GTT
Asn
>WENV170151895
CEOE01004966
254188
Alphaproteobacteria
CCA
Trp
>WENV170151957
CEOE01010763
341164
Alphaproteobacteria
GCC
Gly
>WENV170151959
CEOE01011146
377950
Alphaproteobacteria
CAC
Val
>WENV170151980
CEOE01013601
105992
Alphaproteobacteria
TAG
Leu
>WENV170151981
CEOE01013625
157999
Alphaproteobacteria
TCT
Arg
>WENV170152047
CEOE01023884
424918
Alphaproteobacteria
TCC
Gly
>WENV170152062
CEOE01028403
417264
Alphaproteobacteria
CTG
Gln
>WENV170152123
CEOE01038740
80917
Alphaproteobacteria
CAG
Leu
>WENV170152133
CEOE01041467
252328
Alphaproteobacteria
TTT
Lys
>WENV170152167
CEOE01047485
241021
Alphaproteobacteria
GGC
Ala
>WENV170152174
CEOE01048008
375044
Alphaproteobacteria
GCC
Gly
>WENV170152258
CEOE01062507
148353
Alphaproteobacteria
CAT
Met
>WENV170152265
CEOE01066310
16408
Alphaproteobacteria
GGA
Ser
>WENV170152276
CEOE01070380
80918
Alphaproteobacteria
GAG
Leu
>WENV170152305
CEOE01081576
148083
Alphaproteobacteria
ACG
Arg
>WENV170152337
CEOE01091684
412477
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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