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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170417496
CEUL01347348
239236
Gammaproteobacteria
>WENV170417332
CEUL01295590
149035
Gammaproteobacteria
CCG
Arg
>WENV170416367
CEUL01120872
283668
Gammaproteobacteria
TTT
Lys
>WENV170415699
CEUL01060606
61925
Gammaproteobacteria
TAA
Leu
>WENV170415312
CEUL01031390
160030
Gammaproteobacteria
GGG
Pro
>WENV170414917
CEUL01005223
185163
Gammaproteobacteria
ACG
Arg
>WENV170415233
CEUL01026003
240642
Gammaproteobacteria
GTT
Asn
>WENV170415518
CEUL01046969
149036
Gammaproteobacteria
CCA
Trp
>WENV170416193
CEUL01109039
412799
Gammaproteobacteria
GCA
Cys
>WENV170414935
CEUL01006280
340801
Gammaproteobacteria
CCT
Arg
>WENV170415081
CEUL01015216
279906
Gammaproteobacteria
TGC
Ala
>WENV170414916
CEUL01005223
10767
Gammaproteobacteria
GCT
Ser
>WENV170415231
CEUL01025806
173040
Gammaproteobacteria
GAC
Val
>WENV170414867
CEUL01001278
145713
Gammaproteobacteria
CAT
Met
>WENV170415057
CEUL01014268
412373
Gammaproteobacteria
GCA
Cys
>WENV170416015
CEUL01088770
151889
Gammaproteobacteria
CAT
Met
>WENV170415731
CEUL01063130
128930
Gammaproteobacteria
GTC
Asp
>WENV170416925
CEUL01148855
128930
Gammaproteobacteria
GTC
Asp
>WENV170415619
CEUL01054425
237421
Gammaproteobacteria
TGT
Thr
>WENV170416281
CEUL01114866
163882
Gammaproteobacteria
GAC
Val
>WENV170416315
CEUL01117211
203054
Gammaproteobacteria
ACG
Arg
>WENV170416975
CEUL01149736
45411
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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