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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170447804
CEUY01399950
166654
Gammaproteobacteria
GAC
Val
>WENV170445893
CEUY01077154
235887
Gammaproteobacteria
GTG
His
>WENV170448024
CEUY01473289
144810
Gammaproteobacteria
TCG
Arg
>WENV170448023
CEUY01473289
253766
Gammaproteobacteria
TTT
Lys
>WENV170447168
CEUY01197021
146435
Gammaproteobacteria
TGG
Pro
>WENV170446210
CEUY01105785
279385
Gammaproteobacteria
TTT
Lys
>WENV170446211
CEUY01105785
279385
Gammaproteobacteria
TTT
Lys
>WENV170445594
CEUY01049595
235341
Gammaproteobacteria
TGT
Thr
>WENV170446803
CEUY01167657
147779
Gammaproteobacteria
CAT
Met
>WENV170447083
CEUY01191635
443007
Gammaproteobacteria
CCC
Gly
>WENV170447245
CEUY01201049
235451
Gammaproteobacteria
GTT
Asn
>WENV170445627
CEUY01053246
283668
Gammaproteobacteria
TTT
Lys
>WENV170446462
CEUY01133963
58822
Gammaproteobacteria
CAA
Leu
>WENV170445059
CEUY01019097
145367
Gammaproteobacteria
GGG
Pro
>WENV170446833
CEUY01170859
145196
Gammaproteobacteria
CAT
Met
>WENV170447967
CEUY01461295
197713
Gammaproteobacteria
CAT
Met
>WENV170447267
CEUY01202249
181949
Gammaproteobacteria
CAT
Met
>WENV170447807
CEUY01400529
144919
Gammaproteobacteria
CCT
Arg
>WENV170447771
CEUY01389312
373590
Gammaproteobacteria
TTG
Gln
>WENV170445417
CEUY01039229
149036
Gammaproteobacteria
CCA
Trp
>WENV170445692
CEUY01058080
149036
Gammaproteobacteria
CCA
Trp
>WENV170447331
CEUY01204642
144913
Gammaproteobacteria
TCT
Arg
>WENV170445005
CEUY01015148
322642
Gammaproteobacteria
GGT
Thr
>WENV170445537
CEUY01046257
322642
Gammaproteobacteria
GGT
Thr
>WENV170448093
CEUY01483459
145261
Gammaproteobacteria
CAT
Met
>WENV170445422
CEUY01039542
235448
Gammaproteobacteria
CAT
Met
>WENV170448029
CEUY01474063
44873
Gammaproteobacteria
TGA
Ser
>WENV170446410
CEUY01126090
145369
Gammaproteobacteria
CGG
Pro
>WENV170445185
CEUY01025214
411622
Gammaproteobacteria
GCA
Cys
>WENV170445409
CEUY01038355
411622
Gammaproteobacteria
GCA
Cys
>WENV170444856
CEUY01007273
195299
Gammaproteobacteria
CAT
Met
>WENV170446945
CEUY01181511
162284
Gammaproteobacteria
CCA
Trp
>WENV170444839
CEUY01006235
175987
Gammaproteobacteria
CGG
Pro
>WENV170444874
CEUY01008626
199268
Gammaproteobacteria
ACG
Arg
>WENV170444970
CEUY01013821
199268
Gammaproteobacteria
ACG
Arg
>WENV170444971
CEUY01013821
199268
Gammaproteobacteria
ACG
Arg
>WENV170444972
CEUY01013821
199268
Gammaproteobacteria
ACG
Arg
>WENV170445288
CEUY01031929
16389
Gammaproteobacteria
TGA
Ser
>WENV170445807
CEUY01068537
252289
Gammaproteobacteria
TTT
Lys
>WENV170445808
CEUY01068537
252289
Gammaproteobacteria
TTT
Lys
>WENV170445562
CEUY01047263
149038
Gammaproteobacteria
TGG
Pro
>WENV170445937
CEUY01080642
309581
Gammaproteobacteria
GAA
Phe
>WENV170446942
CEUY01181285
62501
Gammaproteobacteria
CAG
Leu
>WENV170444956
CEUY01013069
145237
Gammaproteobacteria
CAT
Met
>WENV170445597
CEUY01049595
235344
Gammaproteobacteria
GGT
Thr
>WENV170445318
CEUY01033407
96362
Gammaproteobacteria
TAG
Leu
>WENV170447394
CEUY01205976
146836
Gammaproteobacteria
CCT
Arg
>WENV170445335
CEUY01034212
269152
Gammaproteobacteria
GTG
His
>WENV170445589
CEUY01048751
59830
Gammaproteobacteria
CAA
Leu
>WENV170446642
CEUY01151241
235785
Gammaproteobacteria
CAT
Met
>WENV170445602
CEUY01050417
96103
Gammaproteobacteria
CAA
Leu
>WENV170447808
CEUY01400540
341782
Gammaproteobacteria
TTG
Gln
>WENV170445418
CEUY01039423
147022
Gammaproteobacteria
CCG
Arg
>WENV170444823
CEUY01005253
193275
Gammaproteobacteria
GAT
Ile
>WENV170445822
CEUY01070962
235886
Gammaproteobacteria
TTC
Glu
>WENV170447615
CEUY01312933
238372
Gammaproteobacteria
CCT
Arg
>WENV170444855
CEUY01007273
116943
Gammaproteobacteria
GAG
Leu
>WENV170445205
CEUY01026911
243921
Gammaproteobacteria
TTT
Lys
>WENV170445206
CEUY01026911
243921
Gammaproteobacteria
TTT
Lys
>WENV170445352
CEUY01035343
59658
Gammaproteobacteria
CAA
Leu
>WENV170445165
CEUY01023289
203054
Gammaproteobacteria
ACG
Arg
>WENV170447223
CEUY01199733
182592
Gammaproteobacteria
GAC
Val
>WENV170447395
CEUY01205979
149037
Gammaproteobacteria
GAC
Val
>WENV170446594
CEUY01145933
237159
Gammaproteobacteria
GTG
His
>WENV170444849
CEUY01006835
411735
Gammaproteobacteria
GCA
Cys
>WENV170446737
CEUY01161373
45411
Gammaproteobacteria
GGA
Ser
>WENV170444883
CEUY01008925
101786
Gammaproteobacteria
GAG
Leu
>WENV170445255
CEUY01029655
198797
Gammaproteobacteria
TGG
Pro
>WENV170446373
CEUY01122116
58746
Gammaproteobacteria
CAG
Leu
>WENV170446045
CEUY01089045
276263
Gammaproteobacteria
TGC
Ala
>WENV170445797
CEUY01068113
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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