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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170469074
CEVF01082762
252328
Alphaproteobacteria
TTT
Lys
>WENV170468863
CEVF01066624
237493
Alphaproteobacteria
CCA
Trp
>WENV170469984
CEVF01152090
351461
Alphaproteobacteria
TTG
Gln
>WENV170469337
CEVF01107290
149985
Alphaproteobacteria
ACG
Arg
>WENV170469245
CEVF01097443
99726
Alphaproteobacteria
TAG
Leu
>WENV170468082
CEVF01009355
147089
Alphaproteobacteria
ACG
Arg
>WENV170468022
CEVF01005115
58865
Alphaproteobacteria
GAG
Leu
>WENV170468279
CEVF01021731
113700
Alphaproteobacteria
>WENV170469338
CEVF01107345
113700
Alphaproteobacteria
>WENV170469122
CEVF01087139
23468
Alphaproteobacteria
GCT
Ser
>WENV170469251
CEVF01098042
23468
Alphaproteobacteria
GCT
Ser
>WENV170469879
CEVF01147672
23468
Alphaproteobacteria
GCT
Ser
>WENV170468307
CEVF01024035
339724
Alphaproteobacteria
TTG
Gln
>WENV170468846
CEVF01065846
338282
Alphaproteobacteria
GTT
Asn
>WENV170470597
CEVF01304143
95928
Alphaproteobacteria
TAG
Leu
>WENV170470445
CEVF01274817
239035
Alphaproteobacteria
CGC
Ala
>WENV170469686
CEVF01134677
243897
Alphaproteobacteria
TGC
Ala
>WENV170468258
CEVF01020169
339846
Alphaproteobacteria
GAC
Val
>WENV170469222
CEVF01095050
340288
Alphaproteobacteria
GCC
Gly
>WENV170469221
CEVF01095050
339290
Alphaproteobacteria
GGT
Thr
>WENV170470526
CEVF01291910
82652
Alphaproteobacteria
GTA
Tyr
>WENV170470571
CEVF01300643
147879
Alphaproteobacteria
TGG
Pro
>WENV170468974
CEVF01073709
345376
Alphaproteobacteria
GAC
Val
>WENV170469127
CEVF01087651
419996
Alphaproteobacteria
GCA
Cys
>WENV170468179
CEVF01015672
339722
Alphaproteobacteria
TTG
Gln
>WENV170470397
CEVF01261295
99414
Alphaproteobacteria
GTA
Tyr
>WENV170469708
CEVF01136418
157999
Alphaproteobacteria
TCT
Arg
>WENV170468065
CEVF01008037
338757
Alphaproteobacteria
GAC
Val
>WENV170469704
CEVF01136091
257000
Alphaproteobacteria
GAA
Phe
>WENV170469596
CEVF01128088
147361
Alphaproteobacteria
GGG
Pro
>WENV170470014
CEVF01152936
339725
Alphaproteobacteria
GAA
Phe
>WENV170468915
CEVF01070853
151730
Alphaproteobacteria
CCG
Arg
>WENV170468871
CEVF01067786
167926
Alphaproteobacteria
CAT
Met
>WENV170468940
CEVF01072304
167926
Alphaproteobacteria
CAT
Met
>WENV170469334
CEVF01107151
167926
Alphaproteobacteria
CAT
Met
>WENV170469427
CEVF01114234
167926
Alphaproteobacteria
CAT
Met
>WENV170469562
CEVF01125172
167926
Alphaproteobacteria
CAT
Met
>WENV170468212
CEVF01017929
161002
Alphaproteobacteria
GTG
His
>WENV170469544
CEVF01123103
161002
Alphaproteobacteria
GTG
His
>WENV170468834
CEVF01065145
59164
Alphaproteobacteria
GAG
Leu
>WENV170469954
CEVF01150936
59164
Alphaproteobacteria
GAG
Leu
>WENV170468903
CEVF01070399
148425
Alphaproteobacteria
ACG
Arg
>WENV170469888
CEVF01148053
348781
Alphaproteobacteria
GAA
Phe
>WENV170468111
CEVF01010810
147085
Alphaproteobacteria
CCG
Arg
>WENV170469580
CEVF01126409
338760
Alphaproteobacteria
GAA
Phe
>WENV170469385
CEVF01110871
242985
Alphaproteobacteria
GGC
Ala
>WENV170470022
CEVF01153260
352191
Alphaproteobacteria
GGT
Thr
>WENV170468544
CEVF01041804
258529
Alphaproteobacteria
TGC
Ala
>WENV170468582
CEVF01044736
160158
Alphaproteobacteria
GAT
Ile
>WENV170470601
CEVF01304703
412281
Alphaproteobacteria
CTG
Gln
>WENV170469878
CEVF01147672
349650
Alphaproteobacteria
CAC
Val
>WENV170468817
CEVF01062959
339606
Alphaproteobacteria
>WENV170469703
CEVF01136090
146926
Alphaproteobacteria
GTG
His
>WENV170470023
CEVF01153271
26652
Alphaproteobacteria
GGA
Ser
>WENV170468244
CEVF01019653
150356
Alphaproteobacteria
GTC
Asp
>WENV170470347
CEVF01249831
150356
Alphaproteobacteria
GTC
Asp
>WENV170470564
CEVF01299806
114040
Alphaproteobacteria
CAA
Leu
>WENV170468332
CEVF01025523
342846
Alphaproteobacteria
GAC
Val
>WENV170469450
CEVF01116557
255832
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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