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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV002351
AY934050
293056
Alphaproteobacteria
TGC
Ala
>ENV002357
AY934053
293056
Alphaproteobacteria
TGC
Ala
>ENV003031
AY962315
303708
Alphaproteobacteria
TGC
Ala
>ENV000187
AF151245
185438
Alphaproteobacteria
GAT
Ile
>ENV000237
AF151270
185438
Alphaproteobacteria
GAT
Ile
>ENV000241
AF151272
185438
Alphaproteobacteria
GAT
Ile
>ENV000243
AF151273
185438
Alphaproteobacteria
GAT
Ile
>ENV000249
AF151276
185438
Alphaproteobacteria
GAT
Ile
>ENV000251
AF151277
185438
Alphaproteobacteria
GAT
Ile
>ENV000253
AF151278
185438
Alphaproteobacteria
GAT
Ile
>ENV000289
AF151296
185438
Alphaproteobacteria
GAT
Ile
>ENV000295
AF151299
185438
Alphaproteobacteria
GAT
Ile
>ENV001018
AY458633
185438
Alphaproteobacteria
GAT
Ile
>ENV001028
AY458637
185438
Alphaproteobacteria
GAT
Ile
>ENV001682
AY933694
185438
Alphaproteobacteria
GAT
Ile
>ENV001684
AY933695
185438
Alphaproteobacteria
GAT
Ile
>ENV001698
AY933702
185438
Alphaproteobacteria
GAT
Ile
>ENV001702
AY933704
185438
Alphaproteobacteria
GAT
Ile
>ENV001704
AY933705
185438
Alphaproteobacteria
GAT
Ile
>ENV001707
AY933707
185438
Alphaproteobacteria
GAT
Ile
>ENV001709
AY933708
185438
Alphaproteobacteria
GAT
Ile
>ENV001767
AY933739
185438
Alphaproteobacteria
GAT
Ile
>ENV001769
AY933740
185438
Alphaproteobacteria
GAT
Ile
>ENV001866
AY933792
185438
Alphaproteobacteria
GAT
Ile
>ENV001868
AY933793
185438
Alphaproteobacteria
GAT
Ile
>ENV001926
AY933824
185438
Alphaproteobacteria
GAT
Ile
>ENV001947
AY933835
185438
Alphaproteobacteria
GAT
Ile
>ENV002087
AY933911
185438
Alphaproteobacteria
GAT
Ile
>ENV002089
AY933912
185438
Alphaproteobacteria
GAT
Ile
>ENV002105
AY933920
185438
Alphaproteobacteria
GAT
Ile
>ENV002107
AY933921
185438
Alphaproteobacteria
GAT
Ile
>ENV002109
AY933922
185438
Alphaproteobacteria
GAT
Ile
>ENV002111
AY933923
185438
Alphaproteobacteria
GAT
Ile
>ENV002113
AY933924
185438
Alphaproteobacteria
GAT
Ile
>ENV002115
AY933925
185438
Alphaproteobacteria
GAT
Ile
>ENV002117
AY933926
185438
Alphaproteobacteria
GAT
Ile
>ENV002119
AY933927
185438
Alphaproteobacteria
GAT
Ile
>ENV002121
AY933928
185438
Alphaproteobacteria
GAT
Ile
>ENV002123
AY933929
185438
Alphaproteobacteria
GAT
Ile
>ENV002125
AY933930
185438
Alphaproteobacteria
GAT
Ile
>ENV002127
AY933931
185438
Alphaproteobacteria
GAT
Ile
>ENV002129
AY933932
185438
Alphaproteobacteria
GAT
Ile
>ENV002131
AY933933
185438
Alphaproteobacteria
GAT
Ile
>ENV002133
AY933934
185438
Alphaproteobacteria
GAT
Ile
>ENV002135
AY933935
185438
Alphaproteobacteria
GAT
Ile
>ENV002146
AY933941
185438
Alphaproteobacteria
GAT
Ile
>ENV002156
AY933946
185438
Alphaproteobacteria
GAT
Ile
>ENV002158
AY933947
185438
Alphaproteobacteria
GAT
Ile
>ENV002162
AY933949
185438
Alphaproteobacteria
GAT
Ile
>ENV002166
AY933951
185438
Alphaproteobacteria
GAT
Ile
>ENV002174
AY933955
185438
Alphaproteobacteria
GAT
Ile
>ENV002178
AY933957
185438
Alphaproteobacteria
GAT
Ile
>ENV002180
AY933958
185438
Alphaproteobacteria
GAT
Ile
>ENV002182
AY933959
185438
Alphaproteobacteria
GAT
Ile
>ENV002184
AY933960
185438
Alphaproteobacteria
GAT
Ile
>ENV002186
AY933961
185438
Alphaproteobacteria
GAT
Ile
>ENV002188
AY933962
185438
Alphaproteobacteria
GAT
Ile
>ENV002192
AY933965
185438
Alphaproteobacteria
GAT
Ile
>ENV002195
AY933967
185438
Alphaproteobacteria
GAT
Ile
>ENV002197
AY933968
185438
Alphaproteobacteria
GAT
Ile
>ENV002199
AY933969
185438
Alphaproteobacteria
GAT
Ile
>ENV002201
AY933970
185438
Alphaproteobacteria
GAT
Ile
>ENV002203
AY933971
185438
Alphaproteobacteria
GAT
Ile
>ENV002209
AY933974
185438
Alphaproteobacteria
GAT
Ile
>ENV002211
AY933975
185438
Alphaproteobacteria
GAT
Ile
>ENV002215
AY933977
185438
Alphaproteobacteria
GAT
Ile
>ENV002217
AY933978
185438
Alphaproteobacteria
GAT
Ile
>ENV002221
AY933980
185438
Alphaproteobacteria
GAT
Ile
>ENV002223
AY933981
185438
Alphaproteobacteria
GAT
Ile
>ENV002225
AY933982
185438
Alphaproteobacteria
GAT
Ile
>ENV002227
AY933983
185438
Alphaproteobacteria
GAT
Ile
>ENV002229
AY933984
185438
Alphaproteobacteria
GAT
Ile
>ENV002233
AY933986
185438
Alphaproteobacteria
GAT
Ile
>ENV002235
AY933987
185438
Alphaproteobacteria
GAT
Ile
>ENV002237
AY933988
185438
Alphaproteobacteria
GAT
Ile
>ENV002241
AY933990
185438
Alphaproteobacteria
GAT
Ile
>ENV002253
AY933996
185438
Alphaproteobacteria
GAT
Ile
>ENV002267
AY934004
185438
Alphaproteobacteria
GAT
Ile
>ENV002271
AY934006
185438
Alphaproteobacteria
GAT
Ile
>ENV002401
AY934079
185438
Alphaproteobacteria
GAT
Ile
>ENV002524
AY934157
185438
Alphaproteobacteria
GAT
Ile
>ENV002693
AY934244
185438
Alphaproteobacteria
GAT
Ile
>ENV002718
AY934257
185438
Alphaproteobacteria
GAT
Ile
>ENV003733
DQ009435
185438
Alphaproteobacteria
GAT
Ile
>ENV003735
DQ009436
185438
Alphaproteobacteria
GAT
Ile
>ENV003737
DQ009437
185438
Alphaproteobacteria
GAT
Ile
>ENV003739
DQ009438
185438
Alphaproteobacteria
GAT
Ile
>ENV003741
DQ009439
185438
Alphaproteobacteria
GAT
Ile
>ENV003747
DQ009442
185438
Alphaproteobacteria
GAT
Ile
>ENV003749
DQ009443
185438
Alphaproteobacteria
GAT
Ile
>ENV003773
DQ009455
185438
Alphaproteobacteria
GAT
Ile
>ENV001329
AY713454
195945
Alphaproteobacteria
GAT
Ile
>ENV001341
AY713467
195945
Alphaproteobacteria
GAT
Ile
>ENV000058
AB236005
243897
Alphaproteobacteria
TGC
Ala
>ENV001330
AY713454
251610
Alphaproteobacteria
TGC
Ala
>ENV002170
AY933953
164825
Alphaproteobacteria
GAT
Ile
>ENV002172
AY933954
164825
Alphaproteobacteria
GAT
Ile
>ENV002290
AY934016
164825
Alphaproteobacteria
GAT
Ile
>ENV002308
AY934028
164825
Alphaproteobacteria
GAT
Ile
>ENV002310
AY934029
164825
Alphaproteobacteria
GAT
Ile
>ENV002312
AY934030
164825
Alphaproteobacteria
GAT
Ile
>ENV002314
AY934031
164825
Alphaproteobacteria
GAT
Ile
>ENV002328
AY934039
164825
Alphaproteobacteria
GAT
Ile
>ENV002330
AY934040
164825
Alphaproteobacteria
GAT
Ile
>ENV002354
AY934052
164825
Alphaproteobacteria
GAT
Ile
>ENV002359
AY934055
164825
Alphaproteobacteria
GAT
Ile
>ENV002381
AY934066
164825
Alphaproteobacteria
GAT
Ile
>ENV002385
AY934068
164825
Alphaproteobacteria
GAT
Ile
>ENV003489
DQ009292
242540
Alphaproteobacteria
TGC
Ala
>ENV002336
AY934043
188632
Alphaproteobacteria
GAT
Ile
>ENV002377
AY934064
188632
Alphaproteobacteria
GAT
Ile
>ENV001314
AY627380
160158
Alphaproteobacteria
GAT
Ile
>ENV002342
AY934046
160158
Alphaproteobacteria
GAT
Ile
>ENV002400
AY934078
160158
Alphaproteobacteria
GAT
Ile
>ENV003481
DQ009288
160158
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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