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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170573032
FLOH01004386
145260
Gammaproteobacteria
CAT
Met
>WENV170573035
FLOH01004386
145260
Gammaproteobacteria
CAT
Met
>WENV170572752
FLOH01001257
145713
Gammaproteobacteria
CAT
Met
>WENV170572485
FLOH01000922
150183
Gammaproteobacteria
CCG
Arg
>WENV170572395
FLOH01000811
276551
Gammaproteobacteria
GAA
Phe
>WENV170572953
FLOH01001580
276551
Gammaproteobacteria
GAA
Phe
>WENV170572968
FLOH01001834
276551
Gammaproteobacteria
GAA
Phe
>WENV170571832
FLOH01000333
270352
Gammaproteobacteria
GCC
Gly
>WENV170572698
FLOH01001174
45152
Gammaproteobacteria
GGA
Ser
>WENV170572401
FLOH01000815
162634
Gammaproteobacteria
GTC
Asp
>WENV170572501
FLOH01000946
236366
Gammaproteobacteria
GTG
His
>WENV170572215
FLOH01000632
249892
Gammaproteobacteria
GTT
Asn
>WENV170572242
FLOH01000651
237412
Gammaproteobacteria
TAC
Val
>WENV170572229
FLOH01000640
95716
Gammaproteobacteria
TAG
Leu
>WENV170573033
FLOH01004386
97031
Gammaproteobacteria
TAG
Leu
>WENV170571604
FLOH01000223
236013
Gammaproteobacteria
TGC
Ala
>WENV170571720
FLOH01000278
236013
Gammaproteobacteria
TGC
Ala
>WENV170572216
FLOH01000632
157977
Gammaproteobacteria
TGG
Pro
>WENV170572642
FLOH01001098
157977
Gammaproteobacteria
TGG
Pro
>WENV170570927
FLOH01000040
243485
Gammaproteobacteria
TGT
Thr
>WENV170573055
FLOH01005108
255852
Gammaproteobacteria
TTC
Glu
>WENV170573056
FLOH01005108
255852
Gammaproteobacteria
TTC
Glu
>WENV170572094
FLOH01000527
344326
Gammaproteobacteria
TTC
Glu
>WENV170572356
FLOH01000768
344326
Gammaproteobacteria
TTC
Glu
>WENV170572217
FLOH01000632
252289
Gammaproteobacteria
TTT
Lys
>WENV170572218
FLOH01000632
252289
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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