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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180022977
FTHB01000199
145694
Betaproteobacteria
ACG
Arg
>WENV180022981
FTHB01000230
199861
Betaproteobacteria
CAT
Met
>WENV180022994
FTHB01000402
154591
Betaproteobacteria
CAT
Met
>WENV180022985
FTHB01000274
307571
Betaproteobacteria
CGC
Ala
>WENV180022970
FTHB01000066
260088
Betaproteobacteria
CGT
Thr
>WENV180022993
FTHB01000384
16843
Betaproteobacteria
GGA
Ser
>WENV180022973
FTHB01000110
303627
Betaproteobacteria
TTT
Lys
>WENV180023000
FTHB01000506
303627
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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