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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180027490
FTIZ01001004
96238
Alphaproteobacteria
GAG
Leu
>WENV180027802
FTIZ01105325
96238
Alphaproteobacteria
GAG
Leu
>WENV180028103
FTIZ01751685
96238
Alphaproteobacteria
GAG
Leu
>WENV180027521
FTIZ01002577
159305
Alphaproteobacteria
GTC
Asp
>WENV180027905
FTIZ01238336
114616
Alphaproteobacteria
GTA
Tyr
>WENV180028118
FTIZ01751883
114616
Alphaproteobacteria
GTA
Tyr
>WENV180027532
FTIZ01002870
166353
Alphaproteobacteria
ACG
Arg
>WENV180027596
FTIZ01006000
166353
Alphaproteobacteria
ACG
Arg
>WENV180027639
FTIZ01014021
166353
Alphaproteobacteria
ACG
Arg
>WENV180027760
FTIZ01066443
166353
Alphaproteobacteria
ACG
Arg
>WENV180027998
FTIZ01463154
166353
Alphaproteobacteria
ACG
Arg
>WENV180027935
FTIZ01300543
243630
Alphaproteobacteria
GAA
Phe
>WENV180027496
FTIZ01001385
146818
Alphaproteobacteria
CAT
Met
>WENV180027924
FTIZ01280764
146818
Alphaproteobacteria
CAT
Met
>WENV180027944
FTIZ01327110
146818
Alphaproteobacteria
CAT
Met
>WENV180027973
FTIZ01393419
146818
Alphaproteobacteria
CAT
Met
>WENV180027458
FTIZ01000071
244489
Alphaproteobacteria
CTT
Lys
>WENV180027513
FTIZ01002313
244489
Alphaproteobacteria
CTT
Lys
>WENV180028104
FTIZ01751720
244489
Alphaproteobacteria
CTT
Lys
>WENV180027472
FTIZ01000359
59118
Alphaproteobacteria
CAG
Leu
>WENV180027553
FTIZ01003834
59118
Alphaproteobacteria
CAG
Leu
>WENV180027784
FTIZ01087112
59118
Alphaproteobacteria
CAG
Leu
>WENV180028054
FTIZ01605801
59118
Alphaproteobacteria
CAG
Leu
>WENV180028066
FTIZ01650756
97145
Alphaproteobacteria
TAG
Leu
>WENV180027481
FTIZ01000529
424918
Alphaproteobacteria
TCC
Gly
>WENV180027800
FTIZ01100287
424918
Alphaproteobacteria
TCC
Gly
>WENV180027906
FTIZ01238336
424918
Alphaproteobacteria
TCC
Gly
>WENV180028119
FTIZ01751883
424918
Alphaproteobacteria
TCC
Gly
>WENV180027616
FTIZ01008935
25307
Alphaproteobacteria
GGA
Ser
>WENV180027910
FTIZ01248736
153233
Alphaproteobacteria
GAT
Ile
>WENV180028079
FTIZ01687645
96322
Alphaproteobacteria
CAA
Leu
>WENV180028002
FTIZ01468528
268598
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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