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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180035721
FTLB01001212
155690
Betaproteobacteria
TCT
Arg
>WENV180036105
FTLB01308836
72340
Betaproteobacteria
TAG
Leu
>WENV180035752
FTLB01003649
146768
Betaproteobacteria
CAT
Met
>WENV180035768
FTLB01005477
146768
Betaproteobacteria
CAT
Met
>WENV180035694
FTLB01000001
296710
Betaproteobacteria
TTC
Glu
>WENV180035705
FTLB01000020
296710
Betaproteobacteria
TTC
Glu
>WENV180035783
FTLB01008237
99249
Betaproteobacteria
CAA
Leu
>WENV180035849
FTLB01024245
99249
Betaproteobacteria
CAA
Leu
>WENV180035878
FTLB01031933
239238
Betaproteobacteria
CCA
Trp
>WENV180035905
FTLB01046901
16499
Betaproteobacteria
GGA
Ser
>WENV180036284
FTLB01843347
145695
Betaproteobacteria
GGG
Pro
>WENV180036058
FTLB01202610
292518
Betaproteobacteria
TTT
Lys
>WENV180035715
FTLB01001011
86049
Betaproteobacteria
GTA
Tyr
>WENV180035781
FTLB01008061
25578
Betaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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