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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
254 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170578170
FUFK010002300
17426
Gammaproteobacteria
GCT
Ser
>WENV170578388
FUFK010016430
236031
Gammaproteobacteria
GGC
Ala
>WENV170578413
FUFK010016894
236030
Gammaproteobacteria
CCA
Trp
>WENV170578452
FUFK010017213
238510
Gammaproteobacteria
GCC
Gly
>WENV170578465
FUFK010017266
236028
Gammaproteobacteria
TTT
Lys
>WENV170578496
FUFK010017593
149036
Gammaproteobacteria
CCA
Trp
>WENV170578558
FUFK010019228
235333
Gammaproteobacteria
CGT
Thr
>WENV170578750
FUFK010033868
144815
Gammaproteobacteria
CGG
Pro
>WENV170578845
FUFK010037422
145260
Gammaproteobacteria
CAT
Met
>WENV170578846
FUFK010037422
97031
Gammaproteobacteria
TAG
Leu
>WENV170578849
FUFK010037423
241136
Gammaproteobacteria
TTG
Gln
>WENV170578853
FUFK010037440
411735
Gammaproteobacteria
GCA
Cys
>WENV170578862
FUFK010037452
254364
Gammaproteobacteria
TTC
Glu
>WENV170578929
FUFK010037591
240642
Gammaproteobacteria
GTT
Asn
>WENV170578957
FUFK010037627
238510
Gammaproteobacteria
GCC
Gly
>WENV170578993
FUFK010037728
240642
Gammaproteobacteria
GTT
Asn
>WENV170579049
FUFK010037828
145487
Gammaproteobacteria
TCT
Arg
>WENV170579050
FUFK010037828
236026
Gammaproteobacteria
GTG
His
>WENV170579123
FUFK010038045
260238
Gammaproteobacteria
>WENV170579126
FUFK010038045
238510
Gammaproteobacteria
GCC
Gly
>WENV170579218
FUFK010038315
95717
Gammaproteobacteria
TAG
Leu
>WENV170579346
FUFK010038696
260238
Gammaproteobacteria
>WENV170579376
FUFK010038820
238510
Gammaproteobacteria
GCC
Gly
>WENV170579418
FUFK010038944
236025
Gammaproteobacteria
TTG
Gln
>WENV170579419
FUFK010038944
236025
Gammaproteobacteria
TTG
Gln
>WENV170579420
FUFK010038944
23442
Gammaproteobacteria
GCT
Ser
>WENV170579421
FUFK010038944
171935
Gammaproteobacteria
ACG
Arg
>WENV170579525
FUFK010039483
236031
Gammaproteobacteria
GGC
Ala
>WENV170579540
FUFK010039575
163940
Gammaproteobacteria
CCG
Arg
>WENV170579583
FUFK010039859
95717
Gammaproteobacteria
TAG
Leu
>WENV170579608
FUFK010039978
240642
Gammaproteobacteria
GTT
Asn
>WENV170579650
FUFK010040262
236032
Gammaproteobacteria
GAA
Phe
>WENV170579684
FUFK010040363
16453
Gammaproteobacteria
TGA
Ser
>WENV170579778
FUFK010040903
411735
Gammaproteobacteria
GCA
Cys
>WENV170579844
FUFK010041707
145196
Gammaproteobacteria
CAT
Met
>WENV170579845
FUFK010041731
236031
Gammaproteobacteria
GGC
Ala
>WENV170579862
FUFK010041874
163940
Gammaproteobacteria
CCG
Arg
>WENV170579891
FUFK010042228
16453
Gammaproteobacteria
TGA
Ser
>WENV170579907
FUFK010042446
145491
Gammaproteobacteria
GGG
Pro
>WENV170579909
FUFK010042446
236033
Gammaproteobacteria
TGT
Thr
>WENV170579911
FUFK010042446
411767
Gammaproteobacteria
TCC
Gly
>WENV170579912
FUFK010042446
338635
Gammaproteobacteria
GGT
Thr
>WENV170579940
FUFK010042567
145490
Gammaproteobacteria
CAT
Met
>WENV170579985
FUFK010042920
241136
Gammaproteobacteria
TTG
Gln
>WENV170580007
FUFK010043303
145490
Gammaproteobacteria
CAT
Met
>WENV170580026
FUFK010043537
245602
Gammaproteobacteria
TTT
Lys
>WENV170580071
FUFK010044046
236033
Gammaproteobacteria
TGT
Thr
>WENV170580073
FUFK010044046
411767
Gammaproteobacteria
TCC
Gly
>WENV170580074
FUFK010044046
338635
Gammaproteobacteria
GGT
Thr
>WENV170580075
FUFK010044046
145491
Gammaproteobacteria
GGG
Pro
>WENV170580119
FUFK010044468
98124
Gammaproteobacteria
GAG
Leu
>WENV170580138
FUFK010044562
144811
Gammaproteobacteria
CAT
Met
>WENV170580397
FUFK010046202
260238
Gammaproteobacteria
>WENV170580400
FUFK010046217
240619
Gammaproteobacteria
TGT
Thr
>WENV170580402
FUFK010046217
412476
Gammaproteobacteria
TCC
Gly
>WENV170580403
FUFK010046217
239187
Gammaproteobacteria
GGT
Thr
>WENV170580425
FUFK010046317
236031
Gammaproteobacteria
GGC
Ala
>WENV170580448
FUFK010046512
95717
Gammaproteobacteria
TAG
Leu
>WENV170580540
FUFK010047409
236030
Gammaproteobacteria
CCA
Trp
>WENV170580643
FUFK010048920
145490
Gammaproteobacteria
CAT
Met
>WENV170580658
FUFK010049198
158081
Gammaproteobacteria
GAT
Ile
>WENV170580659
FUFK010049198
236029
Gammaproteobacteria
TGC
Ala
>WENV170580791
FUFK010051412
245841
Gammaproteobacteria
GAA
Phe
>WENV170580992
FUFK010056590
236028
Gammaproteobacteria
TTT
Lys
>WENV170581007
FUFK010056862
260238
Gammaproteobacteria
>WENV170581017
FUFK010056913
163940
Gammaproteobacteria
CCG
Arg
>WENV170581018
FUFK010056914
145196
Gammaproteobacteria
CAT
Met
>WENV170581130
FUFK010058301
244202
Gammaproteobacteria
TTT
Lys
>WENV170581335
FUFK010061380
236028
Gammaproteobacteria
TTT
Lys
>WENV170581353
FUFK010061614
236034
Gammaproteobacteria
CCT
Arg
>WENV170581378
FUFK010061920
236030
Gammaproteobacteria
CCA
Trp
>WENV170581452
FUFK010063480
236032
Gammaproteobacteria
GAA
Phe
>WENV170581488
FUFK010064264
254364
Gammaproteobacteria
TTC
Glu
>WENV170581533
FUFK010064576
244202
Gammaproteobacteria
TTT
Lys
>WENV170581576
FUFK010065012
236032
Gammaproteobacteria
GAA
Phe
>WENV170581684
FUFK010066285
98124
Gammaproteobacteria
GAG
Leu
>WENV170581719
FUFK010066801
145487
Gammaproteobacteria
TCT
Arg
>WENV170581720
FUFK010066801
236026
Gammaproteobacteria
GTG
His
>WENV170582063
FUFK010074060
247088
Gammaproteobacteria
CCA
Trp
>WENV170582162
FUFK010076091
240619
Gammaproteobacteria
TGT
Thr
>WENV170582164
FUFK010076091
412476
Gammaproteobacteria
TCC
Gly
>WENV170582165
FUFK010076091
239187
Gammaproteobacteria
GGT
Thr
>WENV170582372
FUFK010078380
99961
Gammaproteobacteria
GAG
Leu
>WENV170582383
FUFK010078594
247088
Gammaproteobacteria
CCA
Trp
>WENV170582536
FUFK010085771
338635
Gammaproteobacteria
GGT
Thr
>WENV170582578
FUFK010091940
98124
Gammaproteobacteria
GAG
Leu
>WENV170582586
FUFK010094032
45109
Gammaproteobacteria
GGA
Ser
>WENV170582671
FUFK010106567
23369
Gammaproteobacteria
GCT
Ser
>WENV170582672
FUFK010106567
144814
Gammaproteobacteria
ACG
Arg
>WENV170583063
FUFK010121021
238510
Gammaproteobacteria
GCC
Gly
>WENV170583094
FUFK010122242
260238
Gammaproteobacteria
>WENV170583187
FUFK010125702
144820
Gammaproteobacteria
GAT
Ile
>WENV170583200
FUFK010126574
147053
Gammaproteobacteria
GTT
Asn
>WENV170583389
FUFK010135714
245602
Gammaproteobacteria
TTT
Lys
>WENV170583409
FUFK010136659
157977
Gammaproteobacteria
TGG
Pro
>WENV170583686
FUFK010154608
46594
Gammaproteobacteria
GGA
Ser
>WENV170583934
FUFK010176131
145487
Gammaproteobacteria
TCT
Arg
>WENV170583935
FUFK010176131
236026
Gammaproteobacteria
GTG
His
>WENV170583953
FUFK010177534
163940
Gammaproteobacteria
CCG
Arg
>WENV170583973
FUFK010179762
244202
Gammaproteobacteria
TTT
Lys
>WENV170583981
FUFK010180829
244202
Gammaproteobacteria
TTT
Lys
>WENV170583989
FUFK010181546
23369
Gammaproteobacteria
GCT
Ser
>WENV170583990
FUFK010181546
144814
Gammaproteobacteria
ACG
Arg
>WENV170584010
FUFK010183671
149036
Gammaproteobacteria
CCA
Trp
>WENV170584067
FUFK010188516
145196
Gammaproteobacteria
CAT
Met
>WENV170584072
FUFK010188615
263719
Gammaproteobacteria
GGT
Thr
>WENV170584086
FUFK010189543
161596
Gammaproteobacteria
CAT
Met
>WENV170584091
FUFK010189803
95590
Gammaproteobacteria
>WENV170584094
FUFK010189902
145491
Gammaproteobacteria
GGG
Pro
>WENV170584106
FUFK010191951
338233
Gammaproteobacteria
TTG
Gln
>WENV170584132
FUFK010194697
145317
Gammaproteobacteria
ACG
Arg
>WENV170584220
FUFK010199164
254364
Gammaproteobacteria
TTC
Glu
>WENV170584247
FUFK010200119
144995
Gammaproteobacteria
GAT
Ile
>WENV170584260
FUFK010200761
149036
Gammaproteobacteria
CCA
Trp
>WENV170584296
FUFK010204596
145490
Gammaproteobacteria
CAT
Met
>WENV170584323
FUFK010207072
240642
Gammaproteobacteria
GTT
Asn
>WENV170584353
FUFK010209146
240642
Gammaproteobacteria
GTT
Asn
>WENV170584369
FUFK010209839
244202
Gammaproteobacteria
TTT
Lys
>WENV170584436
FUFK010215440
240642
Gammaproteobacteria
GTT
Asn
>WENV170584875
FUFK010244518
254914
Gammaproteobacteria
TGC
Ala
>WENV170585251
FUFK010274150
145491
Gammaproteobacteria
GGG
Pro
>WENV170585451
FUFK010292865
145490
Gammaproteobacteria
CAT
Met
>WENV170585542
FUFK010300091
236030
Gammaproteobacteria
CCA
Trp
>WENV170585609
FUFK010307171
145491
Gammaproteobacteria
GGG
Pro
>WENV170585623
FUFK010308814
144995
Gammaproteobacteria
GAT
Ile
>WENV170585830
FUFK010331496
158081
Gammaproteobacteria
GAT
Ile
>WENV170585831
FUFK010331496
236029
Gammaproteobacteria
TGC
Ala
>WENV170585996
FUFK010351263
238510
Gammaproteobacteria
GCC
Gly
>WENV170586307
FUFK010392769
238510
Gammaproteobacteria
GCC
Gly
>WENV170586333
FUFK010398066
236026
Gammaproteobacteria
GTG
His
>WENV170586349
FUFK010399484
260238
Gammaproteobacteria
>WENV170586386
FUFK010404523
147123
Gammaproteobacteria
CAT
Met
>WENV170586387
FUFK010404523
97031
Gammaproteobacteria
TAG
Leu
>WENV170586456
FUFK010418188
147117
Gammaproteobacteria
GTC
Asp
>WENV170586556
FUFK010426728
149038
Gammaproteobacteria
TGG
Pro
>WENV170586624
FUFK010432644
235886
Gammaproteobacteria
TTC
Glu
>WENV170586879
FUFK010450860
171935
Gammaproteobacteria
ACG
Arg
>WENV170586906
FUFK010452760
254914
Gammaproteobacteria
TGC
Ala
>WENV170587131
FUFK010468980
23442
Gammaproteobacteria
GCT
Ser
>WENV170587228
FUFK010476197
238510
Gammaproteobacteria
GCC
Gly
>WENV170587515
FUFK010498583
260238
Gammaproteobacteria
>WENV170587537
FUFK010499680
145491
Gammaproteobacteria
GGG
Pro
>WENV170587578
FUFK010502946
260238
Gammaproteobacteria
>WENV170587617
FUFK010505562
236028
Gammaproteobacteria
TTT
Lys
>WENV170587657
FUFK010508258
244202
Gammaproteobacteria
TTT
Lys
>WENV170587697
FUFK010511396
128930
Gammaproteobacteria
GTC
Asp
>WENV170587845
FUFK010521388
240642
Gammaproteobacteria
GTT
Asn
>WENV170587850
FUFK010521529
411735
Gammaproteobacteria
GCA
Cys
>WENV170587954
FUFK010530311
238510
Gammaproteobacteria
GCC
Gly
>WENV170588087
FUFK010539992
240642
Gammaproteobacteria
GTT
Asn
>WENV170588164
FUFK010545267
257778
Gammaproteobacteria
TAC
Val
>WENV170588380
FUFK010557323
244202
Gammaproteobacteria
TTT
Lys
>WENV170588410
FUFK010560098
249887
Gammaproteobacteria
GGT
Thr
>WENV170588485
FUFK010565810
99961
Gammaproteobacteria
GAG
Leu
>WENV170588852
FUFK010598002
244202
Gammaproteobacteria
TTT
Lys
>WENV170589009
FUFK010608912
144995
Gammaproteobacteria
GAT
Ile
>WENV170589131
FUFK010619433
254914
Gammaproteobacteria
TGC
Ala
>WENV170589530
FUFK010649558
145491
Gammaproteobacteria
GGG
Pro
>WENV170589847
FUFK010672856
46594
Gammaproteobacteria
GGA
Ser
>WENV170589983
FUFK010683403
144995
Gammaproteobacteria
GAT
Ile
>WENV170590218
FUFK010703844
157977
Gammaproteobacteria
TGG
Pro
>WENV170590412
FUFK010719017
236032
Gammaproteobacteria
GAA
Phe
>WENV170590418
FUFK010719371
58746
Gammaproteobacteria
CAG
Leu
>WENV170590441
FUFK010719614
240619
Gammaproteobacteria
TGT
Thr
>WENV170590443
FUFK010719614
412476
Gammaproteobacteria
TCC
Gly
>WENV170590444
FUFK010719614
239187
Gammaproteobacteria
GGT
Thr
>WENV170590565
FUFK010723342
145261
Gammaproteobacteria
CAT
Met
>WENV170590568
FUFK010723583
23442
Gammaproteobacteria
GCT
Ser
>WENV170590569
FUFK010723583
171935
Gammaproteobacteria
ACG
Arg
>WENV170590687
FUFK010730053
147159
Gammaproteobacteria
>WENV170590701
FUFK010731718
236032
Gammaproteobacteria
GAA
Phe
>WENV170590706
FUFK010732098
145317
Gammaproteobacteria
ACG
Arg
>WENV170590714
FUFK010732348
16453
Gammaproteobacteria
TGA
Ser
>WENV170590985
FUFK010746817
145487
Gammaproteobacteria
TCT
Arg
>WENV170590986
FUFK010746817
236026
Gammaproteobacteria
GTG
His
>WENV170591070
FUFK010749361
157977
Gammaproteobacteria
TGG
Pro
>WENV170591073
FUFK010749404
144820
Gammaproteobacteria
GAT
Ile
>WENV170591213
FUFK010755682
160030
Gammaproteobacteria
GGG
Pro
>WENV170591236
FUFK010756691
237421
Gammaproteobacteria
TGT
Thr
>WENV170591268
FUFK010758430
338635
Gammaproteobacteria
GGT
Thr
>WENV170591505
FUFK010776881
145491
Gammaproteobacteria
GGG
Pro
>WENV170591587
FUFK010782197
145491
Gammaproteobacteria
GGG
Pro
>WENV170591604
FUFK010783400
145196
Gammaproteobacteria
CAT
Met
>WENV170591691
FUFK010786104
148148
Gammaproteobacteria
GAC
Val
>WENV170591695
FUFK010786245
163940
Gammaproteobacteria
CCG
Arg
>WENV170591745
FUFK010787151
260238
Gammaproteobacteria
>WENV170591780
FUFK010788298
260238
Gammaproteobacteria
>WENV170591949
FUFK010793830
145491
Gammaproteobacteria
GGG
Pro
>WENV170592085
FUFK010798327
260238
Gammaproteobacteria
>WENV170592234
FUFK010802901
240642
Gammaproteobacteria
GTT
Asn
>WENV170592306
FUFK010804282
236031
Gammaproteobacteria
GGC
Ala
>WENV170592309
FUFK010804314
158081
Gammaproteobacteria
GAT
Ile
>WENV170592310
FUFK010804314
236029
Gammaproteobacteria
TGC
Ala
>WENV170592560
FUFK010809802
235344
Gammaproteobacteria
GGT
Thr
>WENV170592566
FUFK010810214
254364
Gammaproteobacteria
TTC
Glu
>WENV170592576
FUFK010810777
144811
Gammaproteobacteria
CAT
Met
>WENV170592585
FUFK010811531
95589
Gammaproteobacteria
TAG
Leu
>WENV170592692
FUFK010815938
46594
Gammaproteobacteria
GGA
Ser
>WENV170592732
FUFK010817546
157977
Gammaproteobacteria
TGG
Pro
>WENV170592924
FUFK010827947
16453
Gammaproteobacteria
TGA
Ser
>WENV170592937
FUFK010828936
144812
Gammaproteobacteria
GGG
Pro
>WENV170593014
FUFK010835280
160030
Gammaproteobacteria
GGG
Pro
>WENV170593031
FUFK010837579
236248
Gammaproteobacteria
TTT
Lys
>WENV170593060
FUFK010840209
145491
Gammaproteobacteria
GGG
Pro
>WENV170593084
FUFK010841507
236028
Gammaproteobacteria
TTT
Lys
>WENV170593115
FUFK010844664
145490
Gammaproteobacteria
CAT
Met
>WENV170593229
FUFK010853267
145490
Gammaproteobacteria
CAT
Met
>WENV170593267
FUFK010854505
44872
Gammaproteobacteria
GGA
Ser
>WENV170593288
FUFK010856045
144820
Gammaproteobacteria
GAT
Ile
>WENV170593373
FUFK010869312
150183
Gammaproteobacteria
CCG
Arg
>WENV170593401
FUFK010874759
158081
Gammaproteobacteria
GAT
Ile
>WENV170593402
FUFK010874759
236029
Gammaproteobacteria
TGC
Ala
>WENV170593598
FUFK010926940
158081
Gammaproteobacteria
GAT
Ile
>WENV170593599
FUFK010926940
236029
Gammaproteobacteria
TGC
Ala
>WENV170593626
FUFK010935828
171935
Gammaproteobacteria
ACG
Arg
>WENV170593694
FUFK010973286
254364
Gammaproteobacteria
TTC
Glu
>WENV170593732
FUFK010989169
16453
Gammaproteobacteria
TGA
Ser
>WENV170593897
FUFK011066662
243899
Gammaproteobacteria
TTT
Lys
>WENV170593994
FUFK011118123
17426
Gammaproteobacteria
GCT
Ser
>WENV170594249
FUFK011250175
160030
Gammaproteobacteria
GGG
Pro
>WENV170594298
FUFK011265954
240084
Gammaproteobacteria
GGT
Thr
>WENV170594311
FUFK011270830
157977
Gammaproteobacteria
TGG
Pro
>WENV170594414
FUFK011310311
246534
Gammaproteobacteria
TAC
Val
>WENV170594536
FUFK011351211
149038
Gammaproteobacteria
TGG
Pro
>WENV170594538
FUFK011351211
236480
Gammaproteobacteria
GTG
His
>WENV170594539
FUFK011351211
97031
Gammaproteobacteria
TAG
Leu
>WENV170594689
FUFK011420034
163882
Gammaproteobacteria
GAC
Val
>WENV170594752
FUFK011458254
158081
Gammaproteobacteria
GAT
Ile
>WENV170594853
FUFK011505851
240642
Gammaproteobacteria
GTT
Asn
>WENV170594870
FUFK011512015
236034
Gammaproteobacteria
CCT
Arg
>WENV170594976
FUFK011557658
145491
Gammaproteobacteria
GGG
Pro
>WENV170595078
FUFK011608523
157977
Gammaproteobacteria
TGG
Pro
>WENV170595124
FUFK011632163
146791
Gammaproteobacteria
GAC
Val
>WENV170595159
FUFK011654254
144813
Gammaproteobacteria
CCT
Arg
>WENV170595324
FUFK011730066
411735
Gammaproteobacteria
GCA
Cys
>WENV170595390
FUFK011763121
240084
Gammaproteobacteria
GGT
Thr
>WENV170595516
FUFK011831893
236025
Gammaproteobacteria
TTG
Gln
>WENV170595563
FUFK011851074
95717
Gammaproteobacteria
TAG
Leu
>WENV170595606
FUFK011873580
58745
Gammaproteobacteria
CAA
Leu
>WENV170595638
FUFK011894189
147112
Gammaproteobacteria
GGG
Pro
>WENV170595646
FUFK011902190
101028
Gammaproteobacteria
GTA
Tyr
>WENV170595663
FUFK011911938
158081
Gammaproteobacteria
GAT
Ile
>WENV170595664
FUFK011911938
236029
Gammaproteobacteria
TGC
Ala
>WENV170595715
FUFK011932889
144995
Gammaproteobacteria
GAT
Ile
>WENV170595826
FUFK011988269
46594
Gammaproteobacteria
GGA
Ser
>WENV170595831
FUFK011989535
95717
Gammaproteobacteria
TAG
Leu
>WENV170595868
FUFK012006529
144995
Gammaproteobacteria
GAT
Ile
>WENV170595914
FUFK012022680
157977
Gammaproteobacteria
TGG
Pro
>WENV170595946
FUFK012031490
144995
Gammaproteobacteria
GAT
Ile
>WENV170595962
FUFK012039907
16396
Gammaproteobacteria
TGA
Ser
>WENV170596061
FUFK012089214
17426
Gammaproteobacteria
GCT
Ser
>WENV170596115
FUFK012115346
157977
Gammaproteobacteria
TGG
Pro
>WENV170596230
FUFK012150609
244202
Gammaproteobacteria
TTT
Lys
>WENV170596303
FUFK012168454
237421
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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