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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170649340
JRYC01001505
243038
Alphaproteobacteria
TGC
Ala
>WENV170649416
JRYC01006666
345452
Alphaproteobacteria
GAC
Val
>WENV170649494
JRYC01012097
345452
Alphaproteobacteria
GAC
Val
>WENV170649573
JRYC01025553
345452
Alphaproteobacteria
GAC
Val
>WENV170649493
JRYC01011991
24893
Alphaproteobacteria
GGA
Ser
>WENV170649345
JRYC01001649
342732
Alphaproteobacteria
CCC
Gly
>WENV170649382
JRYC01003693
243630
Alphaproteobacteria
GAA
Phe
>WENV170649330
JRYC01001049
345492
Alphaproteobacteria
TAC
Val
>WENV170649814
JRYC01170959
159476
Alphaproteobacteria
ACG
Arg
>WENV170649544
JRYC01018665
366631
Alphaproteobacteria
TAC
Val
>WENV170649552
JRYC01019889
146852
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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