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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170696111
LGVE01223552
162266
Bacteroidota
CAT
Met
>WENV170695644
LGVE01141412
163866
Bacteroidota
TCG
Arg
>WENV170695823
LGVE01176556
361294
Bacteroidota
GGT
Thr
>WENV170695699
LGVE01155763
294483
Bacteroidota
TTT
Lys
>WENV170695922
LGVE01187428
294483
Bacteroidota
TTT
Lys
>WENV170695658
LGVE01146156
187493
Bacteroidota
GGC
Ala
>WENV170695606
LGVE01129390
364423
Bacteroidota
GGT
Thr
>WENV170695622
LGVE01134866
301737
Bacteroidota
TCC
Gly
>WENV170695822
LGVE01176556
301737
Bacteroidota
TCC
Gly
>WENV170695987
LGVE01193802
127288
Bacteroidota
TGG
Pro
>WENV170695073
LGVE01040960
343033
Bacteroidota
TTC
Glu
>WENV170696053
LGVE01205130
290994
Bacteroidota
CAT
Met
>WENV170694769
LGVE01006835
159518
Bacteroidota
GAT
Ile
>WENV170695364
LGVE01083331
150454
Bacteroidota
TGT
Thr
>WENV170695712
LGVE01157846
240901
Bacteroidota
TTT
Lys
>WENV170695989
LGVE01194301
185921
Bacteroidota
GTC
Asp
>WENV170695679
LGVE01152853
146530
Bacteroidota
TGT
Thr
>WENV170695595
LGVE01127122
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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