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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180087861
MPMF02001119
237493
Alphaproteobacteria
CCA
Trp
>WENV180088572
MPMF02036031
80917
Alphaproteobacteria
CAG
Leu
>WENV180088385
MPMF02027473
58865
Alphaproteobacteria
GAG
Leu
>WENV180088265
MPMF02021834
267922
Alphaproteobacteria
CCA
Trp
>WENV180088539
MPMF02034928
66752
Alphaproteobacteria
CAG
Leu
>WENV180093293
MPMF02312113
66752
Alphaproteobacteria
CAG
Leu
>WENV180093962
MPMF02357394
66752
Alphaproteobacteria
CAG
Leu
>WENV180089930
MPMF02110246
113700
Alphaproteobacteria
>WENV180088638
MPMF02039575
185438
Alphaproteobacteria
GAT
Ile
>WENV180091318
MPMF02188285
185438
Alphaproteobacteria
GAT
Ile
>WENV180092884
MPMF02288698
185767
Alphaproteobacteria
CCG
Arg
>WENV180093286
MPMF02311663
236134
Alphaproteobacteria
TAC
Val
>WENV180091082
MPMF02174066
200119
Alphaproteobacteria
CAT
Met
>WENV180093639
MPMF02334540
200119
Alphaproteobacteria
CAT
Met
>WENV180093746
MPMF02341803
200119
Alphaproteobacteria
CAT
Met
>WENV180094060
MPMF02364394
200119
Alphaproteobacteria
CAT
Met
>WENV180094076
MPMF02364965
200119
Alphaproteobacteria
CAT
Met
>WENV180090635
MPMF02149421
430732
Alphaproteobacteria
CCC
Gly
>WENV180092255
MPMF02249780
147334
Alphaproteobacteria
CAT
Met
>WENV180092776
MPMF02281575
113716
Alphaproteobacteria
CAA
Leu
>WENV180091221
MPMF02182773
192195
Alphaproteobacteria
GTC
Asp
>WENV180090229
MPMF02128228
252148
Alphaproteobacteria
TGT
Thr
>WENV180090484
MPMF02141965
254522
Alphaproteobacteria
GAA
Phe
>WENV180089129
MPMF02066461
260015
Alphaproteobacteria
CTC
Glu
>WENV180089459
MPMF02085876
260015
Alphaproteobacteria
CTC
Glu
>WENV180090025
MPMF02115654
260015
Alphaproteobacteria
CTC
Glu
>WENV180091310
MPMF02187501
260015
Alphaproteobacteria
CTC
Glu
>WENV180093414
MPMF02319152
20849
Alphaproteobacteria
GGA
Ser
>WENV180088221
MPMF02019033
369678
Alphaproteobacteria
GGT
Thr
>WENV180090314
MPMF02133773
191695
Alphaproteobacteria
CCT
Arg
>WENV180088352
MPMF02026099
193837
Alphaproteobacteria
CAT
Met
>WENV180093327
MPMF02314045
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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