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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180693335
OCZS011163355
146896
Betaproteobacteria
TTG
Gln
>WENV180692712
OCZS010716062
152292
Betaproteobacteria
TTG
Gln
>WENV180695197
OCZS013167912
146768
Betaproteobacteria
CAT
Met
>WENV180695386
OCZS013414451
260088
Betaproteobacteria
CGT
Thr
>WENV180691786
OCZS010216486
239294
Betaproteobacteria
GCC
Gly
>WENV180691435
OCZS010123469
412167
Betaproteobacteria
GCA
Cys
>WENV180691687
OCZS010187384
251462
Betaproteobacteria
GCC
Gly
>WENV180692616
OCZS010639984
99249
Betaproteobacteria
CAA
Leu
>WENV180691052
OCZS010053634
239247
Betaproteobacteria
CCA
Trp
>WENV180695554
OCZS013632206
248203
Betaproteobacteria
GAA
Phe
>WENV180694966
OCZS012867420
59085
Betaproteobacteria
TAG
Leu
>WENV180691473
OCZS010134593
245575
Betaproteobacteria
CGT
Thr
>WENV180692410
OCZS010517936
339485
Betaproteobacteria
CAC
Val
>WENV180692768
OCZS010751754
147331
Betaproteobacteria
CAT
Met
>WENV180692507
OCZS010578576
147666
Betaproteobacteria
CAT
Met
>WENV180692243
OCZS010423907
352197
Betaproteobacteria
GGT
Thr
>WENV180694881
OCZS012790365
238582
Betaproteobacteria
CGT
Thr
>WENV180691941
OCZS010277778
4907
Betaproteobacteria
GCT
Ser
>WENV180694158
OCZS012018845
254339
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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