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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180786863
ODIS01000370
243647
Bacillota
TTT
Lys
>WENV180787679
ODIS01011430
243647
Bacillota
TTT
Lys
>WENV180788773
ODIS01115744
178679
Bacillota
CAT
Met
>WENV180786995
ODIS01000820
16842
Bacillota
CGA
Ser
>WENV180788553
ODIS01074947
390153
Bacillota
GCC
Gly
>WENV180787077
ODIS01001136
37213
Bacillota
TGA
Ser
>WENV180787346
ODIS01004105
37213
Bacillota
TGA
Ser
>WENV180787697
ODIS01011854
37213
Bacillota
TGA
Ser
>WENV180788896
ODIS01147039
342730
Bacillota
CTC
Glu
>WENV180788613
ODIS01083875
305341
Bacillota
GTG
His
>WENV180789243
ODIS01350252
339890
Bacillota
TTG
Gln
>WENV180788710
ODIS01100934
359540
Bacillota
GTT
Asn
>WENV180788887
ODIS01143585
148348
Bacillota
GTC
Asp
>WENV180788903
ODIS01148244
243099
Bacillota
GTT
Asn
>WENV180789331
ODIS01463644
389888
Bacillota
GCC
Gly
>WENV180788133
ODIS01033970
307003
Bacillota
TGC
Ala
>WENV180788998
ODIS01183794
235137
Bacillota
TGC
Ala
>WENV180789248
ODIS01356504
235137
Bacillota
TGC
Ala
>WENV180789280
ODIS01394340
308424
Bacillota
TTT
Lys
>WENV180786864
ODIS01000370
391536
Bacillota
TTC
Glu
>WENV180789254
ODIS01360932
391536
Bacillota
TTC
Glu
>WENV180788886
ODIS01143585
241761
Bacillota
TAC
Val
>WENV180787602
ODIS01009687
16834
Bacillota
GCT
Ser
>WENV180787222
ODIS01002344
114002
Bacillota
CAA
Leu
>WENV180788530
ODIS01073288
392638
Bacillota
TGT
Thr
>WENV180787464
ODIS01006622
113951
Bacillota
GTA
Tyr
>WENV180786865
ODIS01000370
243612
Bacillota
TAC
Val
>WENV180789255
ODIS01360932
243612
Bacillota
TAC
Val
>WENV180787856
ODIS01019196
199366
Bacillota
CAT
Met
>WENV180788035
ODIS01027197
199366
Bacillota
CAT
Met
>WENV180788021
ODIS01026643
81382
Bacillota
GAG
Leu
>WENV180788751
ODIS01111632
341796
Bacillota
CCG
Arg
>WENV180788542
ODIS01074546
286137
Bacillota
GAA
Phe
>WENV180787946
ODIS01022475
338676
Bacillota
CCG
Arg
>WENV180788874
ODIS01140614
338676
Bacillota
CCG
Arg
>WENV180788034
ODIS01027197
81373
Bacillota
GTA
Tyr
>WENV180787439
ODIS01006116
147135
Bacillota
ACG
Arg
>WENV180789235
ODIS01345544
380077
Bacillota
GCC
Gly
>WENV180788015
ODIS01026138
342895
Bacillota
CAT
Met
>WENV180787235
ODIS01002458
190275
Bacillota
TCT
Arg
>WENV180787544
ODIS01008232
194150
Bacillota
TGG
Pro
>WENV180788253
ODIS01041538
185292
Bacillota
ACG
Arg
>WENV180788699
ODIS01099355
185292
Bacillota
ACG
Arg
>WENV180788134
ODIS01033970
152019
Bacillota
GAT
Ile
>WENV180788893
ODIS01145873
152019
Bacillota
GAT
Ile
>WENV180786801
ODIS01000245
235197
Bacillota
GTC
Asp
>WENV180787684
ODIS01011490
235197
Bacillota
GTC
Asp
>WENV180786803
ODIS01000245
368876
Bacillota
GCC
Gly
>WENV180786861
ODIS01000370
368876
Bacillota
GCC
Gly
>WENV180788711
ODIS01100934
388132
Bacillota
TTC
Glu
>WENV180788528
ODIS01073288
235288
Bacillota
TAC
Val
>WENV180788885
ODIS01143585
241526
Bacillota
CTT
Lys
>WENV180788532
ODIS01073288
118077
Bacillota
>WENV180788527
ODIS01073288
436750
Bacillota
TCC
Gly
>WENV180789367
ODIS01467803
147183
Bacillota
GTT
Asn
>WENV180787677
ODIS01011430
243613
Bacillota
GTG
His
>WENV180788531
ODIS01073288
108675
Bacillota
GTA
Tyr
>WENV180788540
ODIS01074546
347851
Bacillota
TTC
Glu
>WENV180789102
ODIS01234099
144672
Bacillota
TCT
Arg
>WENV180787499
ODIS01007129
152491
Bacillota
CAT
Met
>WENV180788924
ODIS01155788
74162
Bacillota
CAA
Leu
>WENV180788529
ODIS01073288
199895
Bacillota
GTC
Asp
>WENV180787855
ODIS01019196
243098
Bacillota
GGT
Thr
>WENV180788534
ODIS01073288
144762
Bacillota
TCT
Arg
>WENV180787562
ODIS01008480
241638
Bacillota
GTG
His
>WENV180787495
ODIS01007129
273029
Bacillota
TGT
Thr
>WENV180787498
ODIS01007129
281472
Bacillota
GGT
Thr
>WENV180787546
ODIS01008232
178024
Bacillota
TCT
Arg
>WENV180787950
ODIS01022639
315448
Bacillota
GGT
Thr
>WENV180786808
ODIS01000260
413657
Bacillota
CCC
Gly
>WENV180787200
ODIS01002165
152018
Bacillota
CCT
Arg
>WENV180788022
ODIS01026643
81598
Bacillota
CAG
Leu
>WENV180788328
ODIS01048793
384950
Bacillota
GCC
Gly
>WENV180789050
ODIS01212966
384950
Bacillota
GCC
Gly
>WENV180786862
ODIS01000370
287034
Bacillota
GTT
Asn
>WENV180789253
ODIS01360932
287034
Bacillota
GTT
Asn
>WENV180787678
ODIS01011430
343027
Bacillota
TTG
Gln
>WENV180787344
ODIS01004046
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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