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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180845287
ODKT01000084
81880
Gammaproteobacteria
GAG
Leu
>WENV180846486
ODKT01012089
81880
Gammaproteobacteria
GAG
Leu
>WENV180846098
ODKT01005032
23435
Gammaproteobacteria
TGA
Ser
>WENV180845903
ODKT01002840
30640
Gammaproteobacteria
GGA
Ser
>WENV180846759
ODKT01022176
238438
Gammaproteobacteria
>WENV180846760
ODKT01022176
238438
Gammaproteobacteria
>WENV180848096
ODKT01382142
238438
Gammaproteobacteria
>WENV180847930
ODKT01260603
103428
Gammaproteobacteria
TAG
Leu
>WENV180845980
ODKT01003595
3276
Gammaproteobacteria
>WENV180845747
ODKT01001887
108171
Gammaproteobacteria
GTA
Tyr
>WENV180846066
ODKT01004603
145168
Gammaproteobacteria
CAT
Met
>WENV180846561
ODKT01014890
150561
Gammaproteobacteria
ACG
Arg
>WENV180846562
ODKT01014890
150561
Gammaproteobacteria
ACG
Arg
>WENV180846563
ODKT01014890
150561
Gammaproteobacteria
ACG
Arg
>WENV180847652
ODKT01128968
339913
Gammaproteobacteria
TTT
Lys
>WENV180848115
ODKT01383126
339913
Gammaproteobacteria
TTT
Lys
>WENV180845736
ODKT01001775
195299
Gammaproteobacteria
CAT
Met
>WENV180845787
ODKT01002108
195299
Gammaproteobacteria
CAT
Met
>WENV180848005
ODKT01348216
3247
Gammaproteobacteria
GCT
Ser
>WENV180845633
ODKT01001308
358575
Gammaproteobacteria
TCC
Gly
>WENV180846578
ODKT01015108
58828
Gammaproteobacteria
TAA
Leu
>WENV180847263
ODKT01056866
58828
Gammaproteobacteria
TAA
Leu
>WENV180846587
ODKT01015395
8480
Gammaproteobacteria
GCT
Ser
>WENV180845724
ODKT01001697
3278
Gammaproteobacteria
>WENV180846919
ODKT01029397
268376
Gammaproteobacteria
CTT
Lys
>WENV180845757
ODKT01001942
268904
Gammaproteobacteria
GTG
His
>WENV180845323
ODKT01000121
90409
Gammaproteobacteria
CAA
Leu
>WENV180845594
ODKT01001044
147499
Gammaproteobacteria
CTT
Lys
>WENV180846374
ODKT01009752
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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