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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180924354
ODTK01003586
256200
Betaproteobacteria
CGT
Thr
>WENV180924710
ODTK01012578
155690
Betaproteobacteria
TCT
Arg
>WENV180923795
ODTK01000184
16593
Betaproteobacteria
TGA
Ser
>WENV180924421
ODTK01004733
16593
Betaproteobacteria
TGA
Ser
>WENV180923855
ODTK01000257
159509
Betaproteobacteria
CAT
Met
>WENV180923910
ODTK01000359
159509
Betaproteobacteria
CAT
Met
>WENV180924677
ODTK01011079
159509
Betaproteobacteria
CAT
Met
>WENV180925481
ODTK01199048
159509
Betaproteobacteria
CAT
Met
>WENV180924280
ODTK01002521
58732
Betaproteobacteria
CAG
Leu
>WENV180924453
ODTK01005395
127390
Betaproteobacteria
TGG
Pro
>WENV180924764
ODTK01015096
412288
Betaproteobacteria
GCA
Cys
>WENV180924058
ODTK01000903
235250
Betaproteobacteria
>WENV180924059
ODTK01000903
235250
Betaproteobacteria
>WENV180924060
ODTK01000903
235250
Betaproteobacteria
>WENV180925505
ODTK01207034
235250
Betaproteobacteria
>WENV180924021
ODTK01000763
95890
Betaproteobacteria
CAA
Leu
>WENV180924140
ODTK01001380
144721
Betaproteobacteria
GTC
Asp
>WENV180923780
ODTK01000166
240188
Betaproteobacteria
GAA
Phe
>WENV180924099
ODTK01001138
240188
Betaproteobacteria
GAA
Phe
>WENV180924103
ODTK01001164
240188
Betaproteobacteria
GAA
Phe
>WENV180924446
ODTK01005102
240188
Betaproteobacteria
GAA
Phe
>WENV180925488
ODTK01200081
155338
Betaproteobacteria
>WENV180924518
ODTK01006780
352197
Betaproteobacteria
GGT
Thr
>WENV180924228
ODTK01002077
16424
Betaproteobacteria
GGA
Ser
>WENV180924214
ODTK01001912
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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