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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181049862
ODYD01002758
81880
Gammaproteobacteria
GAG
Leu
>WENV181049569
ODYD01000662
401437
Gammaproteobacteria
TTG
Gln
>WENV181049570
ODYD01000662
401437
Gammaproteobacteria
TTG
Gln
>WENV181049600
ODYD01000906
401437
Gammaproteobacteria
TTG
Gln
>WENV181049745
ODYD01001924
401437
Gammaproteobacteria
TTG
Gln
>WENV181050000
ODYD01004384
30640
Gammaproteobacteria
GGA
Ser
>WENV181049472
ODYD01000307
238438
Gammaproteobacteria
>WENV181049473
ODYD01000307
238438
Gammaproteobacteria
>WENV181049599
ODYD01000906
103428
Gammaproteobacteria
TAG
Leu
>WENV181049815
ODYD01002323
3276
Gammaproteobacteria
>WENV181051151
ODYD01214626
108171
Gammaproteobacteria
GTA
Tyr
>WENV181049571
ODYD01000662
145168
Gammaproteobacteria
CAT
Met
>WENV181050291
ODYD01011888
112351
Gammaproteobacteria
GTA
Tyr
>WENV181050323
ODYD01013352
150561
Gammaproteobacteria
ACG
Arg
>WENV181049463
ODYD01000253
413551
Gammaproteobacteria
CCA
Trp
>WENV181050762
ODYD01054511
339913
Gammaproteobacteria
TTT
Lys
>WENV181050763
ODYD01054511
339913
Gammaproteobacteria
TTT
Lys
>WENV181050435
ODYD01018907
195299
Gammaproteobacteria
CAT
Met
>WENV181050292
ODYD01011888
358575
Gammaproteobacteria
TCC
Gly
>WENV181050465
ODYD01019800
147498
Gammaproteobacteria
GAC
Val
>WENV181049983
ODYD01004099
268376
Gammaproteobacteria
CTT
Lys
>WENV181049552
ODYD01000583
147761
Gammaproteobacteria
TGG
Pro
>WENV181049625
ODYD01000955
147761
Gammaproteobacteria
TGG
Pro
>WENV181050181
ODYD01008222
90409
Gammaproteobacteria
CAA
Leu
>WENV181049478
ODYD01000315
147499
Gammaproteobacteria
CTT
Lys
>WENV181050158
ODYD01007521
4379
Gammaproteobacteria
>WENV181049554
ODYD01000583
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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