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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181137504
OEGJ01005206
256200
Betaproteobacteria
CGT
Thr
>WENV181137535
OEGJ01006317
155690
Betaproteobacteria
TCT
Arg
>WENV181138159
OEGJ01139442
152292
Betaproteobacteria
TTG
Gln
>WENV181137809
OEGJ01030469
178702
Betaproteobacteria
CAT
Met
>WENV181137454
OEGJ01004211
412288
Betaproteobacteria
GCA
Cys
>WENV181137469
OEGJ01004553
307597
Betaproteobacteria
GTT
Asn
>WENV181138019
OEGJ01078010
307597
Betaproteobacteria
GTT
Asn
>WENV181137199
OEGJ01000723
235250
Betaproteobacteria
>WENV181137662
OEGJ01012114
235250
Betaproteobacteria
>WENV181137909
OEGJ01041119
235250
Betaproteobacteria
>WENV181138223
OEGJ01179204
235250
Betaproteobacteria
>WENV181137601
OEGJ01008453
387094
Betaproteobacteria
GGT
Thr
>WENV181137115
OEGJ01000284
240188
Betaproteobacteria
GAA
Phe
>WENV181137915
OEGJ01043107
240188
Betaproteobacteria
GAA
Phe
>WENV181137736
OEGJ01018526
155338
Betaproteobacteria
>WENV181137910
OEGJ01041148
155338
Betaproteobacteria
>WENV181137085
OEGJ01000249
16424
Betaproteobacteria
GGA
Ser
>WENV181137796
OEGJ01027370
238786
Betaproteobacteria
>WENV181138045
OEGJ01085386
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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