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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181173262
OEIV011330827
7214
Gammaproteobacteria
GCT
Ser
>WENV181171929
OEIV010410522
159316
Gammaproteobacteria
GGG
Pro
>WENV181172252
OEIV010565035
155696
Gammaproteobacteria
TCT
Arg
>WENV181169525
OEIV010003594
279385
Gammaproteobacteria
TTT
Lys
>WENV181169219
OEIV010000725
281920
Gammaproteobacteria
CCA
Trp
>WENV181170069
OEIV010022195
412176
Gammaproteobacteria
CCC
Gly
>WENV181169735
OEIV010008797
17426
Gammaproteobacteria
GCT
Ser
>WENV181173136
OEIV011228561
182303
Gammaproteobacteria
GTG
His
>WENV181170026
OEIV010020166
185755
Gammaproteobacteria
GAT
Ile
>WENV181169589
OEIV010004695
292565
Gammaproteobacteria
TTC
Glu
>WENV181170613
OEIV010064308
237412
Gammaproteobacteria
TAC
Val
>WENV181171520
OEIV010255489
162437
Gammaproteobacteria
TCT
Arg
>WENV181169993
OEIV010018808
106361
Gammaproteobacteria
TAG
Leu
>WENV181170658
OEIV010071772
341782
Gammaproteobacteria
TTG
Gln
>WENV181172348
OEIV010614727
277276
Gammaproteobacteria
CTC
Glu
>WENV181173280
OEIV011345748
428943
Gammaproteobacteria
>WENV181170064
OEIV010021973
250885
Gammaproteobacteria
TGC
Ala
>WENV181170501
OEIV010051092
353410
Gammaproteobacteria
CTG
Gln
>WENV181173391
OEIV011434054
243921
Gammaproteobacteria
TTT
Lys
>WENV181170242
OEIV010032957
17108
Gammaproteobacteria
GCT
Ser
>WENV181170595
OEIV010062031
254331
Gammaproteobacteria
GGC
Ala
>WENV181171967
OEIV010427123
251608
Gammaproteobacteria
GAA
Phe
>WENV181169395
OEIV010002187
411735
Gammaproteobacteria
GCA
Cys
>WENV181172338
OEIV010611519
97679
Gammaproteobacteria
GAG
Leu
>WENV181170281
OEIV010035237
45152
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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