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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181241933
OFFF01013716
237957
Bacillota
GTT
Asn
>WENV181241600
OFFF01002542
240192
Bacillota
CTG
Gln
>WENV181242026
OFFF01024371
147487
Bacillota
ACG
Arg
>WENV181241692
OFFF01004343
16567
Bacillota
CGA
Ser
>WENV181241495
OFFF01001539
235154
Bacillota
GTT
Asn
>WENV181241932
OFFF01013542
241441
Bacillota
GCC
Gly
>WENV181241994
OFFF01019017
302150
Bacillota
TAC
Val
>WENV181241775
OFFF01006530
59312
Bacillota
CAG
Leu
>WENV181241760
OFFF01005804
293599
Bacillota
CTT
Lys
>WENV181242021
OFFF01024371
237265
Bacillota
TAC
Val
>WENV181241542
OFFF01001877
59655
Bacillota
CAG
Leu
>WENV181241928
OFFF01013396
313331
Bacillota
CTC
Glu
>WENV181241285
OFFF01000395
302152
Bacillota
CTT
Lys
>WENV181241286
OFFF01000395
302152
Bacillota
CTT
Lys
>WENV181241796
OFFF01007147
88657
Bacillota
GTA
Tyr
>WENV181241173
OFFF01000083
16359
Bacillota
CGA
Ser
>WENV181241935
OFFF01013716
247786
Bacillota
CGT
Thr
>WENV181241241
OFFF01000241
41154
Bacillota
TAA
Leu
>WENV181242033
OFFF01024371
238151
Bacillota
>WENV181241767
OFFF01006159
247747
Bacillota
GGT
Thr
>WENV181241512
OFFF01001630
96360
Bacillota
GTA
Tyr
>WENV181241649
OFFF01003615
96360
Bacillota
GTA
Tyr
>WENV181242180
OFFF01064278
256115
Bacillota
CGT
Thr
>WENV181242030
OFFF01024371
9848
Bacillota
TGA
Ser
>WENV181241800
OFFF01007173
413152
Bacillota
TCC
Gly
>WENV181241755
OFFF01005691
413152
Bacillota
TCC
Gly
>WENV181241934
OFFF01013716
390525
Bacillota
TTC
Glu
>WENV181241270
OFFF01000317
162445
Bacillota
CAT
Met
>WENV181242061
OFFF01028605
201704
Bacillota
GAT
Ile
>WENV181242022
OFFF01024371
240190
Bacillota
TTT
Lys
>WENV181241240
OFFF01000241
100326
Bacillota
GTA
Tyr
>WENV181241403
OFFF01000893
100326
Bacillota
GTA
Tyr
>WENV181241225
OFFF01000202
147684
Bacillota
ACG
Arg
>WENV181241612
OFFF01002711
147684
Bacillota
ACG
Arg
>WENV181241684
OFFF01004158
147684
Bacillota
ACG
Arg
>WENV181241748
OFFF01005424
147684
Bacillota
ACG
Arg
>WENV181241814
OFFF01007738
147684
Bacillota
ACG
Arg
>WENV181242210
OFFF01078596
412387
Bacillota
GCA
Cys
>WENV181241439
OFFF01001200
239812
Bacillota
CCT
Arg
>WENV181241350
OFFF01000651
18852
Bacillota
GCT
Ser
>WENV181241904
OFFF01011846
245386
Bacillota
CCA
Trp
>WENV181241646
OFFF01003615
339391
Bacillota
TTC
Glu
>WENV181241299
OFFF01000446
85288
Bacillota
GTA
Tyr
>WENV181241385
OFFF01000841
256380
Bacillota
>WENV181241827
OFFF01007995
235127
Bacillota
TTT
Lys
>WENV181241470
OFFF01001399
147276
Bacillota
CCT
Arg
>WENV181242032
OFFF01024371
279755
Bacillota
GTC
Asp
>WENV181241615
OFFF01002916
419877
Bacillota
TCC
Gly
>WENV181241708
OFFF01004655
238974
Bacillota
GAA
Phe
>WENV181242023
OFFF01024371
247849
Bacillota
TGT
Thr
>WENV181242036
OFFF01024371
16595
Bacillota
GCT
Ser
>WENV181242045
OFFF01026058
299139
Bacillota
TGC
Ala
>WENV181241207
OFFF01000151
272488
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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