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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181296850
OFHK01000758
366446
Actinomycetota
GCA
Cys
>WENV181296758
OFHK01000104
238933
Actinomycetota
CTT
Lys
>WENV181297380
OFHK01036539
238933
Actinomycetota
CTT
Lys
>WENV181296824
OFHK01000478
169228
Actinomycetota
CAT
Met
>WENV181296832
OFHK01000570
151886
Actinomycetota
CGC
Ala
>WENV181297156
OFHK01013012
151886
Actinomycetota
CGC
Ala
>WENV181297751
OFHK01122679
151886
Actinomycetota
CGC
Ala
>WENV181296820
OFHK01000472
131548
Actinomycetota
GTC
Asp
>WENV181297526
OFHK01061253
425058
Actinomycetota
GCA
Cys
>WENV181296782
OFHK01000213
145063
Actinomycetota
CGT
Thr
>WENV181296759
OFHK01000112
152190
Actinomycetota
GAT
Ile
>WENV181297042
OFHK01006352
152190
Actinomycetota
GAT
Ile
>WENV181296763
OFHK01000133
238934
Actinomycetota
CTC
Glu
>WENV181297039
OFHK01006174
238934
Actinomycetota
CTC
Glu
>WENV181297196
OFHK01015721
238934
Actinomycetota
CTC
Glu
>WENV181296873
OFHK01001324
290641
Actinomycetota
GGT
Thr
>WENV181297070
OFHK01008031
290641
Actinomycetota
GGT
Thr
>WENV181297440
OFHK01044795
290641
Actinomycetota
GGT
Thr
>WENV181297678
OFHK01102317
45318
Actinomycetota
GGA
Ser
>WENV181296775
OFHK01000186
338413
Actinomycetota
CCG
Arg
>WENV181297410
OFHK01040185
269853
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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