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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181740268
OGQJ01004356
24650
Bacillota
TAA
Leu
>WENV181740290
OGQJ01004654
144612
Bacillota
TCT
Arg
>WENV181740438
OGQJ01007538
144612
Bacillota
TCT
Arg
>WENV181741209
OGQJ01097432
144612
Bacillota
TCT
Arg
>WENV181739287
OGQJ01000010
154063
Bacillota
CGG
Pro
>WENV181741094
OGQJ01062355
235134
Bacillota
GAA
Phe
>WENV181739292
OGQJ01000012
267556
Bacillota
TAC
Val
>WENV181739406
OGQJ01000105
267556
Bacillota
TAC
Val
>WENV181741085
OGQJ01060736
16815
Bacillota
TGA
Ser
>WENV181740252
OGQJ01004235
235098
Bacillota
GAC
Val
>WENV181740442
OGQJ01007651
235098
Bacillota
GAC
Val
>WENV181740543
OGQJ01009586
235098
Bacillota
GAC
Val
>WENV181740667
OGQJ01014017
235098
Bacillota
GAC
Val
>WENV181739957
OGQJ01001736
338152
Bacillota
TTC
Glu
>WENV181739543
OGQJ01000288
148239
Bacillota
TCT
Arg
>WENV181740038
OGQJ01002171
44854
Bacillota
TGA
Ser
>WENV181740059
OGQJ01002359
44854
Bacillota
TGA
Ser
>WENV181740563
OGQJ01010047
44854
Bacillota
TGA
Ser
>WENV181740088
OGQJ01002505
235154
Bacillota
GTT
Asn
>WENV181740899
OGQJ01034953
235154
Bacillota
GTT
Asn
>WENV181739679
OGQJ01000551
347827
Bacillota
TTC
Glu
>WENV181740184
OGQJ01003393
59312
Bacillota
CAG
Leu
>WENV181739334
OGQJ01000037
338147
Bacillota
CTC
Glu
>WENV181739335
OGQJ01000037
338147
Bacillota
CTC
Glu
>WENV181739336
OGQJ01000037
338147
Bacillota
CTC
Glu
>WENV181740151
OGQJ01003004
338147
Bacillota
CTC
Glu
>WENV181741131
OGQJ01071481
235150
Bacillota
TGC
Ala
>WENV181741140
OGQJ01072394
114359
Bacillota
TAG
Leu
>WENV181740160
OGQJ01003122
340802
Bacillota
TTG
Gln
>WENV181740966
OGQJ01043279
338143
Bacillota
CTC
Glu
>WENV181741041
OGQJ01051503
37083
Bacillota
TGA
Ser
>WENV181739983
OGQJ01001806
182792
Bacillota
GTC
Asp
>WENV181739698
OGQJ01000579
41154
Bacillota
TAA
Leu
>WENV181739728
OGQJ01000659
44859
Bacillota
AAG
Leu
>WENV181740289
OGQJ01004645
11034
Bacillota
GGA
Ser
>WENV181740849
OGQJ01029463
235290
Bacillota
TTG
Gln
>WENV181740240
OGQJ01003988
274189
Bacillota
TGT
Thr
>WENV181740505
OGQJ01008880
274189
Bacillota
TGT
Thr
>WENV181740874
OGQJ01032184
173314
Bacillota
GAT
Ile
>WENV181740324
OGQJ01005270
338149
Bacillota
CTC
Glu
>WENV181740517
OGQJ01009095
338149
Bacillota
CTC
Glu
>WENV181740521
OGQJ01009149
338149
Bacillota
CTC
Glu
>WENV181740243
OGQJ01003992
245298
Bacillota
CGG
Pro
>WENV181740322
OGQJ01005197
245298
Bacillota
CGG
Pro
>WENV181740854
OGQJ01029899
245298
Bacillota
CGG
Pro
>WENV181739315
OGQJ01000026
37269
Bacillota
TGA
Ser
>WENV181739866
OGQJ01001271
37269
Bacillota
TGA
Ser
>WENV181740342
OGQJ01005527
37269
Bacillota
TGA
Ser
>WENV181739350
OGQJ01000050
340131
Bacillota
GTT
Asn
>WENV181741177
OGQJ01084757
155089
Bacillota
CAT
Met
>WENV181739734
OGQJ01000664
287000
Bacillota
GTT
Asn
>WENV181740525
OGQJ01009175
258936
Bacillota
GGT
Thr
>WENV181739451
OGQJ01000167
169968
Bacillota
CAT
Met
>WENV181740196
OGQJ01003480
162445
Bacillota
CAT
Met
>WENV181740308
OGQJ01004832
152492
Bacillota
GGG
Pro
>WENV181740395
OGQJ01006376
152492
Bacillota
GGG
Pro
>WENV181740510
OGQJ01008928
152492
Bacillota
GGG
Pro
>WENV181739562
OGQJ01000301
100326
Bacillota
GTA
Tyr
>WENV181739544
OGQJ01000288
144610
Bacillota
GTG
His
>WENV181739551
OGQJ01000291
144610
Bacillota
GTG
His
>WENV181739967
OGQJ01001767
411547
Bacillota
CTG
Gln
>WENV181740132
OGQJ01002900
411547
Bacillota
CTG
Gln
>WENV181740242
OGQJ01003992
411547
Bacillota
CTG
Gln
>WENV181740321
OGQJ01005197
411547
Bacillota
CTG
Gln
>WENV181740544
OGQJ01009605
411547
Bacillota
CTG
Gln
>WENV181740853
OGQJ01029899
411547
Bacillota
CTG
Gln
>WENV181739359
OGQJ01000055
147684
Bacillota
ACG
Arg
>WENV181740039
OGQJ01002171
4624
Bacillota
GCT
Ser
>WENV181740060
OGQJ01002359
4624
Bacillota
GCT
Ser
>WENV181740564
OGQJ01010047
4624
Bacillota
GCT
Ser
>WENV181739600
OGQJ01000368
263765
Bacillota
TAC
Val
>WENV181739859
OGQJ01001242
412387
Bacillota
GCA
Cys
>WENV181739640
OGQJ01000474
248683
Bacillota
TTT
Lys
>WENV181740630
OGQJ01012148
235095
Bacillota
GGT
Thr
>WENV181739813
OGQJ01001041
241471
Bacillota
TGC
Ala
>WENV181741047
OGQJ01052075
239832
Bacillota
TGT
Thr
>WENV181739540
OGQJ01000288
185292
Bacillota
ACG
Arg
>WENV181741135
OGQJ01072394
150597
Bacillota
TCT
Arg
>WENV181740659
OGQJ01013359
353848
Bacillota
GTT
Asn
>WENV181739986
OGQJ01001806
411549
Bacillota
TTG
Gln
>WENV181740383
OGQJ01006162
148188
Bacillota
CCG
Arg
>WENV181740393
OGQJ01006344
148188
Bacillota
CCG
Arg
>WENV181740825
OGQJ01027302
80612
Bacillota
GTA
Tyr
>WENV181739745
OGQJ01000714
256380
Bacillota
>WENV181739510
OGQJ01000219
235127
Bacillota
TTT
Lys
>WENV181741137
OGQJ01072394
235905
Bacillota
GTG
His
>WENV181740869
OGQJ01031919
163943
Bacillota
GTC
Asp
>WENV181740363
OGQJ01005887
241432
Bacillota
TGT
Thr
>WENV181740164
OGQJ01003138
235124
Bacillota
TGG
Pro
>WENV181740331
OGQJ01005398
235124
Bacillota
TGG
Pro
>WENV181741139
OGQJ01072394
237963
Bacillota
TTT
Lys
>WENV181740182
OGQJ01003372
338129
Bacillota
TGT
Thr
>WENV181739607
OGQJ01000389
157838
Bacillota
GTC
Asp
>WENV181740336
OGQJ01005446
144583
Bacillota
ACG
Arg
>WENV181740670
OGQJ01014059
419877
Bacillota
TCC
Gly
>WENV181739982
OGQJ01001806
235171
Bacillota
CCA
Trp
>WENV181739655
OGQJ01000505
238974
Bacillota
GAA
Phe
>WENV181739747
OGQJ01000738
238974
Bacillota
GAA
Phe
>WENV181739894
OGQJ01001434
144621
Bacillota
GTT
Asn
>WENV181740063
OGQJ01002373
144621
Bacillota
GTT
Asn
>WENV181740325
OGQJ01005270
144621
Bacillota
GTT
Asn
>WENV181740518
OGQJ01009095
144621
Bacillota
GTT
Asn
>WENV181740522
OGQJ01009149
144621
Bacillota
GTT
Asn
>WENV181739443
OGQJ01000154
243098
Bacillota
GGT
Thr
>WENV181740046
OGQJ01002226
58712
Bacillota
CAG
Leu
>WENV181740149
OGQJ01002991
58712
Bacillota
CAG
Leu
>WENV181740352
OGQJ01005647
157719
Bacillota
CAT
Met
>WENV181740848
OGQJ01029463
144762
Bacillota
TCT
Arg
>WENV181740004
OGQJ01001939
245296
Bacillota
CCC
Gly
>WENV181739662
OGQJ01000516
344240
Bacillota
GCC
Gly
>WENV181740358
OGQJ01005787
248965
Bacillota
GCC
Gly
>WENV181740068
OGQJ01002396
144594
Bacillota
CAC
Val
>WENV181739842
OGQJ01001158
95563
Bacillota
GTA
Tyr
>WENV181740653
OGQJ01013141
414486
Bacillota
CCC
Gly
>WENV181739509
OGQJ01000219
272488
Bacillota
GAA
Phe
>WENV181740625
OGQJ01012015
119513
Bacillota
CAA
Leu
>WENV181739411
OGQJ01000108
238945
Bacillota
GCC
Gly
>WENV181739515
OGQJ01000234
238945
Bacillota
GCC
Gly
>WENV181739749
OGQJ01000738
238945
Bacillota
GCC
Gly
>WENV181739935
OGQJ01001653
238945
Bacillota
GCC
Gly
>WENV181740270
OGQJ01004423
238945
Bacillota
GCC
Gly
>WENV181739984
OGQJ01001806
249259
Bacillota
GCC
Gly
>WENV181740960
OGQJ01043017
338131
Bacillota
GCC
Gly
>WENV181740011
OGQJ01001989
338128
Bacillota
TTC
Glu
>WENV181739862
OGQJ01001249
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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