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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181883077
OGXI01001579
235146
Actinomycetota
CGT
Thr
>WENV181882932
OGXI01000772
119475
Actinomycetota
TAA
Leu
>WENV181883094
OGXI01001677
235347
Actinomycetota
GGC
Ala
>WENV181882698
OGXI01000242
166493
Actinomycetota
CTT
Lys
>WENV181882807
OGXI01000495
235153
Actinomycetota
CCT
Arg
>WENV181883114
OGXI01001791
37070
Actinomycetota
CGA
Ser
>WENV181883730
OGXI01010685
37070
Actinomycetota
CGA
Ser
>WENV181883251
OGXI01002914
235092
Actinomycetota
CCG
Arg
>WENV181883313
OGXI01003510
235194
Actinomycetota
GTG
His
>WENV181883075
OGXI01001579
273786
Actinomycetota
CGT
Thr
>WENV181883011
OGXI01001212
158720
Actinomycetota
ACG
Arg
>WENV181882805
OGXI01000487
245301
Actinomycetota
GCC
Gly
>WENV181883501
OGXI01005801
411601
Actinomycetota
CCC
Gly
>WENV181883080
OGXI01001607
144826
Actinomycetota
GGG
Pro
>WENV181882857
OGXI01000587
23370
Actinomycetota
GCT
Ser
>WENV181882949
OGXI01000878
174149
Actinomycetota
GAT
Ile
>WENV181883051
OGXI01001432
16219
Actinomycetota
GCT
Ser
>WENV181882836
OGXI01000543
235174
Actinomycetota
TGC
Ala
>WENV181882950
OGXI01000878
235174
Actinomycetota
TGC
Ala
>WENV181882937
OGXI01000809
235101
Actinomycetota
TTT
Lys
>WENV181883704
OGXI01009767
235101
Actinomycetota
TTT
Lys
>WENV181882859
OGXI01000594
121510
Actinomycetota
TAA
Leu
>WENV181883073
OGXI01001558
144625
Actinomycetota
GTC
Asp
>WENV181883535
OGXI01006250
153948
Actinomycetota
GGG
Pro
>WENV181882654
OGXI01000171
44855
Actinomycetota
TGA
Ser
>WENV181883798
OGXI01013683
37212
Actinomycetota
GAG
Leu
>WENV181882680
OGXI01000214
235199
Actinomycetota
CAC
Val
>WENV181882653
OGXI01000171
44862
Actinomycetota
CGA
Ser
>WENV181883228
OGXI01002782
198659
Actinomycetota
TAC
Val
>WENV181883093
OGXI01001677
413665
Actinomycetota
TTG
Gln
>WENV181883024
OGXI01001277
254857
Actinomycetota
CCG
Arg
>WENV181883355
OGXI01004066
16223
Actinomycetota
GAG
Leu
>WENV181882771
OGXI01000406
144593
Actinomycetota
TAT
Ile
>WENV181882856
OGXI01000587
144700
Actinomycetota
CAT
Met
>WENV181883518
OGXI01006012
144636
Actinomycetota
GAT
Ile
>WENV181883520
OGXI01006012
144636
Actinomycetota
GAT
Ile
>WENV181883891
OGXI01018411
243671
Actinomycetota
CTC
Glu
>WENV181884056
OGXI01033743
98279
Actinomycetota
GTA
Tyr
>WENV181883658
OGXI01008796
338148
Actinomycetota
CTG
Gln
>WENV181883892
OGXI01018411
338148
Actinomycetota
CTG
Gln
>WENV181882977
OGXI01001015
235148
Actinomycetota
GTT
Asn
>WENV181883095
OGXI01001681
235148
Actinomycetota
GTT
Asn
>WENV181882960
OGXI01000918
176456
Actinomycetota
TCT
Arg
>WENV181883732
OGXI01010729
144825
Actinomycetota
CAT
Met
>WENV181883667
OGXI01008997
145347
Actinomycetota
CAA
Leu
>WENV181883833
OGXI01015131
338139
Actinomycetota
GTT
Asn
>WENV181883834
OGXI01015131
338139
Actinomycetota
GTT
Asn
>WENV181882728
OGXI01000312
235348
Actinomycetota
CCT
Arg
>WENV181883076
OGXI01001579
113601
Actinomycetota
TAG
Leu
>WENV181883530
OGXI01006157
113601
Actinomycetota
TAG
Leu
>WENV181882972
OGXI01000982
144595
Actinomycetota
CAA
Leu
>WENV181882994
OGXI01001089
144595
Actinomycetota
CAA
Leu
>WENV181882790
OGXI01000457
145343
Actinomycetota
GGG
Pro
>WENV181882862
OGXI01000609
235149
Actinomycetota
CCT
Arg
>WENV181883473
OGXI01005318
235149
Actinomycetota
CCT
Arg
>WENV181882715
OGXI01000280
414234
Actinomycetota
CTG
Gln
>WENV181883899
OGXI01019045
145269
Actinomycetota
CAT
Met
>WENV181883529
OGXI01006157
235121
Actinomycetota
CGT
Thr
>WENV181882973
OGXI01000982
144635
Actinomycetota
TGG
Pro
>WENV181883997
OGXI01026921
144635
Actinomycetota
TGG
Pro
>WENV181883694
OGXI01009582
61501
Actinomycetota
CAG
Leu
>WENV181883723
OGXI01010371
119485
Actinomycetota
TAA
Leu
>WENV181883229
OGXI01002786
429234
Actinomycetota
CTG
Gln
>WENV181882537
OGXI01000028
80622
Actinomycetota
CAG
Leu
>WENV181882780
OGXI01000432
80622
Actinomycetota
CAG
Leu
>WENV181883603
OGXI01007357
7409
Actinomycetota
CGA
Ser
>WENV181883031
OGXI01001320
16222
Actinomycetota
GAG
Leu
>WENV181882616
OGXI01000125
158513
Actinomycetota
TGG
Pro
>WENV181882837
OGXI01000543
235173
Actinomycetota
GGC
Ala
>WENV181883121
OGXI01001830
235173
Actinomycetota
GGC
Ala
>WENV181883758
OGXI01011482
235173
Actinomycetota
GGC
Ala
>WENV181882968
OGXI01000954
243162
Actinomycetota
GTT
Asn
>WENV181882963
OGXI01000933
144660
Actinomycetota
TAC
Val
>WENV181883373
OGXI01004261
278447
Actinomycetota
GTG
His
>WENV181882855
OGXI01000587
95593
Actinomycetota
>WENV181882986
OGXI01001041
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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