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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181896213
OGXS01000107
24650
Bacillota
TAA
Leu
>WENV181896745
OGXS01002737
378157
Bacillota
TTC
Glu
>WENV181897113
OGXS01031456
155113
Bacillota
CGG
Pro
>WENV181896825
OGXS01004203
37213
Bacillota
TGA
Ser
>WENV181896619
OGXS01001193
144612
Bacillota
TCT
Arg
>WENV181896236
OGXS01000127
238169
Bacillota
AGT
Thr
>WENV181896351
OGXS01000293
154063
Bacillota
CGG
Pro
>WENV181896357
OGXS01000300
154063
Bacillota
CGG
Pro
>WENV181896685
OGXS01001770
338152
Bacillota
TTC
Glu
>WENV181896676
OGXS01001630
63862
Bacillota
CAG
Leu
>WENV181896824
OGXS01004165
193699
Bacillota
CAT
Met
>WENV181896428
OGXS01000424
235154
Bacillota
GTT
Asn
>WENV181897195
OGXS01052429
246023
Bacillota
TGC
Ala
>WENV181896879
OGXS01005615
235137
Bacillota
TGC
Ala
>WENV181896772
OGXS01003016
340802
Bacillota
TTG
Gln
>WENV181896785
OGXS01003186
293599
Bacillota
CTT
Lys
>WENV181896985
OGXS01011873
341763
Bacillota
CTC
Glu
>WENV181896327
OGXS01000253
127105
Bacillota
GTG
His
>WENV181896407
OGXS01000391
16524
Bacillota
CGA
Ser
>WENV181896578
OGXS01001030
339584
Bacillota
GCA
Cys
>WENV181896411
OGXS01000393
144668
Bacillota
GTC
Asp
>WENV181897102
OGXS01028443
339803
Bacillota
TTG
Gln
>WENV181896527
OGXS01000771
429429
Bacillota
CCA
Trp
>WENV181896763
OGXS01002868
429429
Bacillota
CCA
Trp
>WENV181896961
OGXS01009475
429429
Bacillota
CCA
Trp
>WENV181896417
OGXS01000401
235117
Bacillota
TAC
Val
>WENV181896746
OGXS01002737
235117
Bacillota
TAC
Val
>WENV181897143
OGXS01036174
247057
Bacillota
TGC
Ala
>WENV181897146
OGXS01036480
362119
Bacillota
GCC
Gly
>WENV181896522
OGXS01000762
274189
Bacillota
TGT
Thr
>WENV181896419
OGXS01000401
235079
Bacillota
GAA
Phe
>WENV181896486
OGXS01000612
235079
Bacillota
GAA
Phe
>WENV181896784
OGXS01003156
295714
Bacillota
GCC
Gly
>WENV181897170
OGXS01044610
238860
Bacillota
GGT
Thr
>WENV181896416
OGXS01000401
271471
Bacillota
GCC
Gly
>WENV181896420
OGXS01000401
271471
Bacillota
GCC
Gly
>WENV181896669
OGXS01001586
155089
Bacillota
CAT
Met
>WENV181896684
OGXS01001770
287000
Bacillota
GTT
Asn
>WENV181896492
OGXS01000620
413152
Bacillota
TCC
Gly
>WENV181896893
OGXS01006022
152492
Bacillota
GGG
Pro
>WENV181896816
OGXS01003945
81172
Bacillota
>WENV181896484
OGXS01000612
235078
Bacillota
TAC
Val
>WENV181896243
OGXS01000135
240017
Bacillota
GCC
Gly
>WENV181896821
OGXS01004061
147684
Bacillota
ACG
Arg
>WENV181896242
OGXS01000135
263765
Bacillota
TAC
Val
>WENV181896658
OGXS01001439
412387
Bacillota
GCA
Cys
>WENV181896905
OGXS01006610
412387
Bacillota
GCA
Cys
>WENV181896433
OGXS01000436
18852
Bacillota
GCT
Ser
>WENV181896211
OGXS01000105
245386
Bacillota
CCA
Trp
>WENV181897026
OGXS01016161
59296
Bacillota
AAG
Leu
>WENV181897141
OGXS01035983
298639
Bacillota
GTT
Asn
>WENV181896297
OGXS01000207
235127
Bacillota
TTT
Lys
>WENV181896584
OGXS01001038
235127
Bacillota
TTT
Lys
>WENV181896581
OGXS01001038
147674
Bacillota
TCT
Arg
>WENV181896467
OGXS01000544
298620
Bacillota
CAT
Met
>WENV181896707
OGXS01002045
235288
Bacillota
TAC
Val
>WENV181896708
OGXS01002045
148140
Bacillota
GTC
Asp
>WENV181896612
OGXS01001141
412076
Bacillota
TCC
Gly
>WENV181897047
OGXS01018593
144672
Bacillota
TCT
Arg
>WENV181896321
OGXS01000242
277200
Bacillota
GGC
Ala
>WENV181896123
OGXS01000028
59664
Bacillota
CAG
Leu
>WENV181896124
OGXS01000028
59664
Bacillota
CAG
Leu
>WENV181896504
OGXS01000662
344240
Bacillota
GCC
Gly
>WENV181896381
OGXS01000352
196632
Bacillota
GTC
Asp
>WENV181896655
OGXS01001434
338127
Bacillota
TTG
Gln
>WENV181897203
OGXS01054537
148141
Bacillota
CTT
Lys
>WENV181896296
OGXS01000207
272488
Bacillota
GAA
Phe
>WENV181896464
OGXS01000539
119513
Bacillota
CAA
Leu
>WENV181897197
OGXS01053258
238857
Bacillota
CCA
Trp
>WENV181896891
OGXS01005987
273862
Bacillota
TGC
Ala
>WENV181897183
OGXS01048870
338207
Bacillota
TTC
Glu
>WENV181896382
OGXS01000352
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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