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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182549550
OJBY01002153
238010
Alphaproteobacteria
TTT
Lys
>WENV182549270
OJBY01000100
237493
Alphaproteobacteria
CCA
Trp
>WENV182549423
OJBY01000856
419488
Alphaproteobacteria
TCC
Gly
>WENV182549623
OJBY01003761
80917
Alphaproteobacteria
CAG
Leu
>WENV182549354
OJBY01000394
412917
Alphaproteobacteria
TCC
Gly
>WENV182549254
OJBY01000065
237489
Alphaproteobacteria
CAT
Met
>WENV182549415
OJBY01000822
237489
Alphaproteobacteria
CAT
Met
>WENV182549729
OJBY01015436
10665
Alphaproteobacteria
GCT
Ser
>WENV182549494
OJBY01001424
241021
Alphaproteobacteria
GGC
Ala
>WENV182549621
OJBY01003649
113700
Alphaproteobacteria
>WENV182549271
OJBY01000101
159305
Alphaproteobacteria
GTC
Asp
>WENV182549362
OJBY01000422
146875
Alphaproteobacteria
GTG
His
>WENV182549562
OJBY01002323
146875
Alphaproteobacteria
GTG
His
>WENV182549661
OJBY01006009
338283
Alphaproteobacteria
CAC
Val
>WENV182549359
OJBY01000402
23671
Alphaproteobacteria
CGA
Ser
>WENV182549426
OJBY01000890
23671
Alphaproteobacteria
CGA
Ser
>WENV182549490
OJBY01001392
338282
Alphaproteobacteria
GTT
Asn
>WENV182549276
OJBY01000102
368245
Alphaproteobacteria
>WENV182549460
OJBY01001186
339723
Alphaproteobacteria
>WENV182549660
OJBY01005912
339723
Alphaproteobacteria
>WENV182549410
OJBY01000783
95928
Alphaproteobacteria
TAG
Leu
>WENV182549583
OJBY01002608
95928
Alphaproteobacteria
TAG
Leu
>WENV182549746
OJBY01026456
340288
Alphaproteobacteria
GCC
Gly
>WENV182549593
OJBY01002920
82652
Alphaproteobacteria
GTA
Tyr
>WENV182549308
OJBY01000193
82652
Alphaproteobacteria
GTA
Tyr
>WENV182549576
OJBY01002524
339722
Alphaproteobacteria
TTG
Gln
>WENV182549467
OJBY01001230
80918
Alphaproteobacteria
GAG
Leu
>WENV182549635
OJBY01004123
80918
Alphaproteobacteria
GAG
Leu
>WENV182549508
OJBY01001512
147334
Alphaproteobacteria
CAT
Met
>WENV182549381
OJBY01000538
157999
Alphaproteobacteria
TCT
Arg
>WENV182549520
OJBY01001673
281594
Alphaproteobacteria
TGT
Thr
>WENV182549327
OJBY01000263
249907
Alphaproteobacteria
CGC
Ala
>WENV182549384
OJBY01000549
249907
Alphaproteobacteria
CGC
Ala
>WENV182549398
OJBY01000654
113716
Alphaproteobacteria
CAA
Leu
>WENV182549699
OJBY01009462
113716
Alphaproteobacteria
CAA
Leu
>WENV182549470
OJBY01001242
236004
Alphaproteobacteria
TTT
Lys
>WENV182549694
OJBY01009288
412279
Alphaproteobacteria
CCC
Gly
>WENV182549307
OJBY01000193
151733
Alphaproteobacteria
GGG
Pro
>WENV182549419
OJBY01000832
151733
Alphaproteobacteria
GGG
Pro
>WENV182549536
OJBY01001901
28682
Alphaproteobacteria
GGA
Ser
>WENV182549609
OJBY01003273
28682
Alphaproteobacteria
GGA
Ser
>WENV182549462
OJBY01001199
23672
Alphaproteobacteria
GCT
Ser
>WENV182549412
OJBY01000805
364533
Alphaproteobacteria
GCC
Gly
>WENV182549568
OJBY01002402
364533
Alphaproteobacteria
GCC
Gly
>WENV182549449
OJBY01001077
341164
Alphaproteobacteria
GCC
Gly
>WENV182549504
OJBY01001488
59164
Alphaproteobacteria
GAG
Leu
>WENV182549251
OJBY01000056
65244
Alphaproteobacteria
CAG
Leu
>WENV182549456
OJBY01001132
163860
Alphaproteobacteria
GGG
Pro
>WENV182549506
OJBY01001506
412477
Alphaproteobacteria
GCA
Cys
>WENV182549735
OJBY01020965
354623
Alphaproteobacteria
GAC
Val
>WENV182549556
OJBY01002234
338760
Alphaproteobacteria
GAA
Phe
>WENV182549390
OJBY01000596
338288
Alphaproteobacteria
TTC
Glu
>WENV182549612
OJBY01003328
338288
Alphaproteobacteria
TTC
Glu
>WENV182549238
OJBY01000027
279830
Alphaproteobacteria
TAC
Val
>WENV182549306
OJBY01000188
187569
Alphaproteobacteria
CCG
Arg
>WENV182549228
OJBY01000016
412281
Alphaproteobacteria
CTG
Gln
>WENV182549567
OJBY01002378
412281
Alphaproteobacteria
CTG
Gln
>WENV182549364
OJBY01000444
369678
Alphaproteobacteria
GGT
Thr
>WENV182549438
OJBY01000948
338287
Alphaproteobacteria
GGT
Thr
>WENV182549376
OJBY01000499
152248
Alphaproteobacteria
TGG
Pro
>WENV182549375
OJBY01000483
339606
Alphaproteobacteria
>WENV182549705
OJBY01010681
113715
Alphaproteobacteria
TAG
Leu
>WENV182549338
OJBY01000317
147289
Alphaproteobacteria
GTC
Asp
>WENV182549570
OJBY01002411
180581
Alphaproteobacteria
TGG
Pro
>WENV182549569
OJBY01002411
174413
Alphaproteobacteria
CAT
Met
>WENV182549424
OJBY01000865
127020
Alphaproteobacteria
TCT
Arg
>WENV182549411
OJBY01000787
236256
Alphaproteobacteria
TAC
Val
>WENV182549301
OJBY01000183
10904
Alphaproteobacteria
GCT
Ser
>WENV182549702
OJBY01010061
191695
Alphaproteobacteria
CCT
Arg
>WENV182549643
OJBY01004576
147088
Alphaproteobacteria
CCT
Arg
>WENV182549357
OJBY01000399
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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