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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182558821
OJDN01004979
237493
Alphaproteobacteria
CCA
Trp
>WENV182558890
OJDN01011494
80917
Alphaproteobacteria
CAG
Leu
>WENV182558911
OJDN01013768
351510
Alphaproteobacteria
GAC
Val
>WENV182558768
OJDN01002821
237489
Alphaproteobacteria
CAT
Met
>WENV182558976
OJDN01028661
10665
Alphaproteobacteria
GCT
Ser
>WENV182558912
OJDN01013863
113700
Alphaproteobacteria
>WENV182558966
OJDN01025872
83401
Alphaproteobacteria
TAA
Leu
>WENV182558987
OJDN01031666
146875
Alphaproteobacteria
GTG
His
>WENV182558816
OJDN01004449
23671
Alphaproteobacteria
CGA
Ser
>WENV182558916
OJDN01014786
338282
Alphaproteobacteria
GTT
Asn
>WENV182558883
OJDN01010761
368245
Alphaproteobacteria
>WENV182558914
OJDN01014207
147083
Alphaproteobacteria
GGG
Pro
>WENV182558862
OJDN01008820
82652
Alphaproteobacteria
GTA
Tyr
>WENV182558957
OJDN01023110
339722
Alphaproteobacteria
TTG
Gln
>WENV182558951
OJDN01021824
157999
Alphaproteobacteria
TCT
Arg
>WENV182558847
OJDN01006729
412279
Alphaproteobacteria
CCC
Gly
>WENV182558754
OJDN01002514
151733
Alphaproteobacteria
GGG
Pro
>WENV182558817
OJDN01004517
339725
Alphaproteobacteria
GAA
Phe
>WENV182558801
OJDN01004178
252148
Alphaproteobacteria
TGT
Thr
>WENV182558935
OJDN01018982
23672
Alphaproteobacteria
GCT
Ser
>WENV182558870
OJDN01009488
364533
Alphaproteobacteria
GCC
Gly
>WENV182558830
OJDN01005458
159427
Alphaproteobacteria
GTG
His
>WENV182558985
OJDN01031015
338288
Alphaproteobacteria
TTC
Glu
>WENV182558762
OJDN01002728
412281
Alphaproteobacteria
CTG
Gln
>WENV182558933
OJDN01018801
349650
Alphaproteobacteria
CAC
Val
>WENV182558909
OJDN01013420
113715
Alphaproteobacteria
TAG
Leu
>WENV182558944
OJDN01020579
59202
Alphaproteobacteria
TAA
Leu
>WENV182558893
OJDN01011592
83323
Alphaproteobacteria
GTA
Tyr
>WENV182558983
OJDN01030165
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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